RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MITFO75030 526 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FAM20BO75063 409 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 LY6HO94772 140 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 TGFAP01135 160 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 TTRP02766 147 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ANXA2P07355 339 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ACKR3P25106 362 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 POLR2IP36954 125 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PMELP40967 661 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ERFP50548 548 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 BMXP51813 675 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PRKXP51817 358 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CAV3P56539 151 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ADARB1P78563 741 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 BDH1Q02338 343 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PAX5Q02548 391 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF154Q13106 437 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 RIPK1Q13546 671 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZMYND11Q15326 602 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 MICBQ29980 383 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ESCO2Q56NI9 601 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CLVS2Q5SYC1 327 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 OGFRL1Q5TC84 451 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF691Q5VV52 312 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 LIPNQ5VXI9 398 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 TMEM236Q5W0B7 351 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 WDR82Q6UXN9 313 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF841Q6ZN19 808 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 C1QL2Q7Z5L3 287 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 NAA40Q86UY6 237 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CATSPERDQ86XM0 798 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF573Q86YE8 665 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CALHM1Q8IU99 346 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CDH26Q8IXH8 852 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 C11orf53Q8IXP5 236 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 SLC35F2Q8IXU6 374 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZDHHC23Q8IYP9 409 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ENTHD1Q8IYW4 607 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 GCSAMQ8N6F7 178 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ICA1LQ8NDH6 482 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 Q8NFD4 153 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 OR1M1Q8NGA1 313 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 OR8B12Q8NGG6 310 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PPP1R35Q8TAP8 253 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FAM81AQ8TBF8 368 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 NPRL2Q8WTW4 380 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ITLN1Q8WWA0 313 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 UPRTQ96BW1 309 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CPNE2Q96FN4 548 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 MED30Q96HR3 178 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 MBOAT4Q96T53 435 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 SMR3AQ99954 134 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 GAL3ST1Q99999 423 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF649Q9BS31 505 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 BEX2Q9BXY8 128 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CHST5Q9GZS9 411 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PBOV1Q9GZY1 135 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FAM234AQ9H0X4 552 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 OR51I2Q9H344 312 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 MED20Q9H944 212 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 NEK6Q9HC98 313 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FGF20Q9NP95 211 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 PTTG3PQ9NZH4 202 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 CNOT2Q9NZN8 540 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 MRM2Q9UI43 246 aaKnown RBP4.08□□□□□ -1.76
PTCD3-213ENST00000480102 ENPP5Q9UJA9 477 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 FZR1Q9UM11 496 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 POLDIP2Q9Y2S7 368 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 KLHDC2Q9Y2U9 406 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 GMPPBQ9Y5P6 360 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 INSIG2Q9Y5U4 225 aa4.08□□□□□ -1.76
PTCD3-213ENST00000480102 RTTNQ86VV8 2226 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 DSCAMO60469 2012 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 A0A1B0GTI1 187 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 PQLC2LA1A4F0 135 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 OOEPA6NGQ2 149 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 ERICH4A6NGS2 130 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 SAC3D1A6NKF1 404 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 TMEM212A6NML5 194 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 F5H5P2 479 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-213ENST00000480102 PLPP2O43688 288 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 GPX5O75715 221 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 GATBO75879 557 aaKnown RBP4.07□□□□□ -1.76
PTCD3-213ENST00000480102 SERPINA3P01011 423 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 RBP4P02753 201 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 CCDC159P0C7I6 412 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 DBTP11182 482 aaKnown RBP4.07□□□□□ -1.76
PTCD3-213ENST00000480102 GYPEP15421 78 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 SRD5A1P18405 259 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 CA6P23280 308 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 RPS27P42677 84 aaKnown RBP4.07□□□□□ -1.76
PTCD3-213ENST00000480102 COMPP49747 757 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-213ENST00000480102 TAS2R43P59537 309 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
PTCD3-213ENST00000480102 ZNF91Q05481 1191 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms