RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 HIST1H2AAQ96QV6 131 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 GPR84Q9NQS5 396 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 PAK1IP1Q9NWT1 392 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-238ENST00000479894 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 OR5V1Q9UGF6 321 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 ENPP5Q9UJA9 477 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 MPC1Q9Y5U8 109 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
HDLBP-238ENST00000479894 hCG_38984A0A1B0GV85 526 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 MDFIC2A0A1B0GVS7 189 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 IGHV1-46P01743 117 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 MT-ND2P03891 347 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 CD2P06729 351 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 CCL1P22362 96 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.33
HDLBP-238ENST00000479894 CD80P33681 288 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 MPV17P39210 176 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 BPIFB3P59826 476 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 CDK5R1Q15078 307 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 TRAM1Q15629 374 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 DEFB112Q30KQ8 113 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 OR2T2Q6IF00 324 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 Q6YL49 198 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 LINC01006Q8NI28 216 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 MRAPQ8TCY5 172 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 GPR148Q8TDV2 347 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 SMIM19Q96E16 107 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 C14orf119Q9NWQ9 140 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-238ENST00000479894 POMT1Q9Y6A1 747 aa12.96□□□□□ -0.33
HDLBP-238ENST00000479894 TRAV40A0A0B4J280 105 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 ANXA2P2A6NMY6 339 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 OR4C45A6NMZ5 311 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-238ENST00000479894 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
HDLBP-238ENST00000479894 CST4P01036 141 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 TNFRSF1AP19438 455 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 CPT2P23786 658 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
HDLBP-238ENST00000479894 MMP15P51511 669 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 LOXL3P58215 753 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 BTNL3Q6UXE8 466 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 Q6ZSR3 168 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 TSPAN14Q8NG11 270 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 OR56B2PQ8NGI1 322 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 UFD1Q92890 307 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 FAM71F1Q96KD3 344 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-238ENST00000479894 CHIAQ9BZP6 476 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 ACOT13Q9NPJ3 140 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 COL7A1Q02388 2944 aa12.95□□□□□ -0.34
HDLBP-238ENST00000479894 LOC107986453A0A1B0GWG9 222 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 IFNL4K9M1U5 179 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 P2RY10O00398 339 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 ZFPL1O95159 310 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 CSF1P09603 554 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 ZNF20P17024 532 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-238ENST00000479894 EMX1Q04741 257 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-238ENST00000479894 MLLT11Q13015 90 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-238ENST00000479894 OR8G1Q15617 311 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 FAM189A2Q15884 450 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 ESCO2Q56NI9 601 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 DMKNQ6E0U4 476 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-238ENST00000479894 KRT74Q7RTS7 529 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 SPARTQ8N0X7 666 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 PP6455Q8WZ26 134 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 DYRK2Q92630 601 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 PPP1R14AQ96A00 147 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 MGLLQ99685 303 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 MICU1Q9BPX6 476 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 POFUT1Q9H488 388 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 V9GYS6 101 aa12.94□□□□□ -0.34
HDLBP-238ENST00000479894 IGHV3OR16-10A0A075B7F0 116 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 SPRY3O43610 288 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 OPN1MWP04001 364 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 CD55P08174 381 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 HSMCR30P0CW71 290 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 OPN1MW2P0DN77 364 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 OPN1MW3P0DN78 364 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 VSIG8P0DPA2 414 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 CELP19835 753 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 KIR3DL2P43630 455 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 NANOS3P60323 173 aaKnown RBP12.93□□□□□ -0.34
HDLBP-238ENST00000479894 SEC61A1P61619 476 aaKnown RBP12.93□□□□□ -0.34
HDLBP-238ENST00000479894 PAX2Q02962 417 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 TPBGQ13641 420 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 CLVS2Q5SYC1 327 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-238ENST00000479894 BHLHE23Q8NDY6 225 aa12.93□□□□□ -0.34
HDLBP-238ENST00000479894 OR5D14Q8NGL3 314 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms