RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NKX3-1Q99801 234 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 PAPOLGQ9BWT3 736 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 C6orf62Q9GZU0 229 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 MMP27Q9H306 513 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ESRP2Q9H6T0 727 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 METTL17Q9H7H0 456 aaPredicted RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 PPP1R3EQ9H7J1 279 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 MRPL15Q9P015 296 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 DAPK2Q9UIK4 370 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 PURGQ9UJV8 347 aaKnown RBP5.67□□□□□ -1.5
USP48-208ENST00000479177 FZR1Q9UM11 496 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 CACNA1DQ01668 2161 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 DOPEY2Q9Y3R5 2298 aa5.67□□□□□ -1.5
USP48-208ENST00000479177 ARFGEF3Q5TH69 2177 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 TACC2O95359 2948 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 IGLV3-9A0A075B6K5 115 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 A0A1B0GWJ7 208 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 PQLC2LA1A4F0 135 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 WIPF3A6NGB9 483 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 C9orf118A6NHY6 69 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ANKRD30BLA7E2S9 258 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ZNF850A8MQ14 1090 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 SHISA9B4DS77 424 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 C19orf84I3L1E1 186 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 TMEM127O75204 238 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 PAHP00439 452 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 HCKP08631 526 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 GCH1P30793 250 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 PEX19P40855 299 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 MMP15P51511 669 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 CLDN12P56749 244 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 KLF3P57682 345 aaPredicted RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
USP48-208ENST00000479177 PRDX4Q13162 271 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 P2RY14Q15391 338 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 DMRTC1Q5HYR2 192 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 HES5Q5TA89 166 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 SLC22A25Q6T423 547 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 MOB3CQ70IA8 216 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 CDH26Q8IXH8 852 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 FTMTQ8N4E7 242 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 JAGN1Q8N5M9 183 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ACBD4Q8NC06 268 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 OR4D6Q8NGJ1 314 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 OR6M1Q8NGM8 313 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 SYNPRQ8TBG9 265 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 TRMT10AQ8TBZ6 339 aaKnown RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 LGALS14Q8TCE9 139 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 FAM222BQ8WU58 562 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ACOT12Q8WYK0 555 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 PIGCQ92535 297 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 DVL3Q92997 716 aaPredicted RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 MRPL24Q96A35 216 aaKnown RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 SLC25A28Q96A46 364 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 FOXRED1Q96CU9 486 aaPredicted RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 RADILQ96JH8 1075 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 WDFY2Q96P53 400 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 SPACA5Q96QH8 159 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 TSC22D3Q99576 134 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 UQCC2Q9BRT2 126 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 TMEM204Q9BSN7 226 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ADAT1Q9BUB4 502 aaKnown RBP5.66□□□□□ -1.5
USP48-208ENST00000479177 PLGRKTQ9HBL7 147 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 ABCB9Q9NP78 766 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 CA10Q9NS85 328 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 OR5V1Q9UGF6 321 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 STEAP1Q9UHE8 339 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 RNF115Q9Y4L5 304 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 MPC1Q9Y5U8 109 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 BAHCC1Q9P281 2608 aa5.66□□□□□ -1.5
USP48-208ENST00000479177 IGKV1-27A0A075B6S5 117 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CLEC18AA5D8T8 446 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ZSCAN5BA6NJL1 495 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OR5B21A6NL26 309 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CTDSP2O14595 271 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MAGEB3O15480 346 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 TIMM8AO60220 97 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 IGHV3-13P01766 116 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OCMP0CE72 109 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 CALCBP10092 127 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CA6P23280 308 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 HTR2CP28335 458 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ZNF93P35789 620 aaPredicted RBP5.65□□□□□ -1.5
USP48-208ENST00000479177 KIR2DL3P43628 341 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 OR3A4PP47883 348 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 POU3F4P49335 361 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 FABP6P51161 128 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 BMXP51813 675 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 SCAND1P57086 179 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ZP1P60852 638 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 RIN1Q13671 783 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 KISS1Q15726 138 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 ADIPOQQ15848 244 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CEACAM21Q3KPI0 293 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 MZT2AQ6P582 158 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 CLEC18BQ6UXF7 455 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 Q6ZR03 302 aa5.65□□□□□ -1.5
USP48-208ENST00000479177 LINC00299Q6ZSB3 139 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms