RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TPGS2Q68CL5 300 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 LEMD1Q68G75 181 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 RTL6Q6ICC9 239 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 ARMC6Q6NXE6 501 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 CSNK2A3Q8NEV1 391 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 RHBDD1Q8TEB9 315 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 CCL25O15444 150 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 CHRNB4P30926 498 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 DEFB134Q4QY38 66 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 GPR157Q5UAW9 335 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 NUFIP2Q7Z417 695 aaKnown RBP18.69■□□□□ 0.58
SDF4-206ENST00000478938 GBGT1Q8N5D6 347 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 GPR119Q8TDV5 335 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 IGSF21Q96ID5 467 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 ALKBH3Q96Q83 286 aaPredicted RBP18.69■□□□□ 0.58
SDF4-206ENST00000478938 LPAR5Q9H1C0 372 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 BANF2Q9H503 90 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 DOCK8Q8NF50 2099 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 TRDCB7Z8K6 153 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 CTSVO60911 334 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 MPIG6BO95866 241 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 HIST1H1DP16402 221 aaKnown RBP18.68■□□□□ 0.58
SDF4-206ENST00000478938 OR10J1P30954 320 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 SP6Q3SY56 376 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 ACY3Q96HD9 319 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 YLPM1P49750 1951 aaKnown RBP18.68■□□□□ 0.58
SDF4-206ENST00000478938 A8MXE2 369 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 GZMHP20718 246 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 IDH3GP51553 393 aaPredicted RBP18.68■□□□□ 0.58
SDF4-206ENST00000478938 ARFRP1Q13795 201 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 RUNX2Q13950 521 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 C1orf140Q5VVS0 124 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 MIEN1Q9BRT3 115 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 CALHM2Q9HA72 323 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 RRAGCQ9HB90 399 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 FUT9Q9Y231 359 aa18.68■□□□□ 0.58
SDF4-206ENST00000478938 PPP5D1E7EU14 171 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 NRG2O14511 850 aaPredicted RBP18.67■□□□□ 0.58
SDF4-206ENST00000478938 C9orf40Q8IXQ3 194 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 KTI12Q96EK9 354 aaPredicted RBP18.67■□□□□ 0.58
SDF4-206ENST00000478938 ABHD6Q9BV23 337 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 Q9Y3F1 56 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 A0A1W2PP11 408 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 FAM230AA0A1W2PPH8 454 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 C20orf202A1L168 122 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 UMODP07911 640 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 CD33P20138 364 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 RAB28P51157 221 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 COL5A1-AS1Q5SY13 56 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 CACUL1Q86Y37 369 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 OR8G5Q8NG78 346 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 C8orf44Q96CB5 159 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 ARHGAP5-AS1Q96IT6 56 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 ANGPTL4Q9BY76 406 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 P4HTMQ9NXG6 502 aa18.67■□□□□ 0.58
SDF4-206ENST00000478938 DOCK9Q9BZ29 2069 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 OR6A2O95222 327 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 KAT7O95251 611 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 SNU13P55769 128 aaKnown RBP18.66■□□□□ 0.58
SDF4-206ENST00000478938 TMEM50BP56557 158 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 OR2L3Q8NG85 312 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 OR52M1Q8NGK5 317 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 CCDC74BQ96LY2 380 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 VN1R1Q9GZP7 353 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 TMEM14DPA8MWL7 114 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 FGF17O60258 216 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 SOD2P04179 222 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 DBHP09172 617 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 PTTG1IPP53801 180 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 SP5Q6BEB4 398 aaPredicted RBP18.66■□□□□ 0.58
SDF4-206ENST00000478938 OR1L6Q8NGR2 347 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 TMEM170AQ8WVE7 144 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 ADOQ96SZ5 270 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 IL21Q9HBE4 155 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 GNG13Q9P2W3 67 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 B3GAT1Q9P2W7 334 aa18.66■□□□□ 0.58
SDF4-206ENST00000478938 ZNF43P17038 809 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 SELENOTP62341 195 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 EWSR1Q01844 656 aaKnown RBP eCLIP18.65■□□□□ 0.586e-9■■■■■ 33.6
SDF4-206ENST00000478938 ROM1Q03395 351 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 VN1R4Q7Z5H5 301 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 SLC22A24Q8N4F4 322 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 MFSD9Q8NBP5 474 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 TP53RKQ96S44 253 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 MSL2Q9HCI7 577 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 MMP25Q9NPA2 562 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 ZNF581Q9P0T4 197 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 A0A1B0GUS0 222 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 LOC102723971A0A1B0GUV8 181 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 RRP8O43159 456 aaKnown RBP18.65■□□□□ 0.58
SDF4-206ENST00000478938 GSTP1P09211 210 aaKnown RBP18.65■□□□□ 0.58
SDF4-206ENST00000478938 OMGP23515 440 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 PNRC1Q12796 327 aaPredicted RBP18.65■□□□□ 0.58
SDF4-206ENST00000478938 NNATQ16517 81 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 SULF2Q8IWU5 870 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 RAB42Q8N4Z0 105 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 GATSQ8NAP1 163 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 TMEM52Q8NDY8 209 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 FAM122AQ96E09 287 aa18.65■□□□□ 0.58
SDF4-206ENST00000478938 PCED1AQ9H1Q7 454 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms