RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 LYG1Q8N1E2 194 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 OR51E1Q8TCB6 317 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ZNF488Q96MN9 340 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 CHID1Q9BWS9 393 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 GPR84Q9NQS5 396 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 OR14J1Q9UGF5 321 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 IKZF2Q9UKS7 526 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 POLDIP2Q9Y2S7 368 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ACOD1A6NK06 481 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 CHST1O43916 411 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 PEX14O75381 377 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 FBXO24O75426 580 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 DHRS3O75911 302 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 NXPH2O95156 264 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
VCL-205ENST00000478896 RIDAP52758 137 aaKnown RBP10.75□□□□□ -0.69
VCL-205ENST00000478896 ESRRGP62508 458 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 ZNF273Q14593 569 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 FBLN7Q53RD9 439 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 ARSJQ5FYB0 599 aaPredicted RBP10.75□□□□□ -0.69
VCL-205ENST00000478896 ZBTB37Q5TC79 503 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 TMEM200BQ69YZ2 307 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 DEGS2Q6QHC5 323 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 REC114Q7Z4M0 266 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 ZNF573Q86YE8 665 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 CD177Q8N6Q3 437 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 OR4S1Q8NGB4 309 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 OR2T27Q8NH04 317 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 CFHR4Q92496 578 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 ITFG2Q969R8 447 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 NSL1Q96IY1 281 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 YIPF3Q9GZM5 350 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 ABCB10Q9NRK6 738 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 VWFP04275 2813 aa10.75□□□□□ -0.69
VCL-205ENST00000478896 TGP01266 2768 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 J3QT63 122 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 ATP8B1O43520 1251 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 SYNGR1O43759 233 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 XPNPEP2O43895 674 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 ARG1P05089 322 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 CALB2P22676 271 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 SLC2A5P22732 501 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 PRDX2P32119 198 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 GYS2P54840 703 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 CDK5Q00535 292 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 SNAPC1Q16533 368 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 TMEM236Q5W0B7 351 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 CRIP3Q6Q6R5 217 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 KRT74Q7RTS7 529 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 PIGWQ7Z7B1 504 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 LHFPL4Q7Z7J7 247 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 TMEM179BQ7Z7N9 219 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 ZNF679Q8IYX0 411 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 PPP1R14AQ96A00 147 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 AJUBAQ96IF1 538 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 TEAD3Q99594 435 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 GPR173Q9NS66 373 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 TVP23BQ9NYZ1 205 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.691e-7■■■□□ 18.3
VCL-205ENST00000478896 TMEM14AQ9Y6G1 99 aa10.74□□□□□ -0.69
VCL-205ENST00000478896 LOC110117498-PIK3R3F6TDL0 507 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ZNF254O75437 659 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ALX3O95076 343 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 TK1P04183 234 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 PGA5P0DJD9 388 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ANXA8P13928 327 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 HABP2Q14520 560 aaPredicted RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 KPRPQ5T749 579 aaPredicted RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 ASRGL1Q7L266 308 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ADGRG5Q8IZF4 528 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 HS3ST5Q8IZT8 346 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ASCC1Q8N9N2 400 aaKnown RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 CANT1Q8WVQ1 401 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ASB17Q8WXJ9 295 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 FOXRED1Q96CU9 486 aaPredicted RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 OR8B4Q96RC9 309 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 MOB1AQ9H8S9 216 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 ZNF702PQ9H963 129 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 SLC25A19Q9HC21 320 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 NUFIP1Q9UHK0 495 aaKnown RBP10.73□□□□□ -0.69
VCL-205ENST00000478896 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 TCF19Q9Y242 345 aa10.73□□□□□ -0.69
VCL-205ENST00000478896 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 IGLV3-1P01715 115 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 TTRP02766 147 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 CD28P10747 220 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 PRKACGP22612 351 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 EDDM3BP56851 147 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 CNN3Q15417 329 aaKnown RBP10.72□□□□□ -0.69
VCL-205ENST00000478896 OXLD1Q5BKU9 147 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 BCL2L15Q5TBC7 163 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 Q6ZPA2 131 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 TMEM219Q86XT9 240 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms