RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 A0A1B0GTI1 187 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 MKRN2OSH3BPM6 223 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 BET1O15155 118 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 FOXH1O75593 365 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 ADRA2AP08913 450 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 LINC00869P0C866 280 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 GIMD1P0DJR0 217 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 GTF2H1P32780 548 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 MAGEA3P43357 314 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 RAB38P57729 211 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 UBE2KP61086 200 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 SYCP1Q15431 976 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 BSXQ3C1V8 233 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 ZFP1Q6P2D0 407 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 MRPL52Q86TS9 123 aaKnown RBP3.16□□□□□ -1.9
UPF3B-203ENST00000478840 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 RNF10Q8N5U6 811 aaKnown RBP3.16□□□□□ -1.9
UPF3B-203ENST00000478840 ACBD4Q8NC06 268 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 OR2M7Q8NG81 312 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 UBA3Q8TBC4 463 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 OR5P2Q8WZ92 322 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 HGDQ93099 445 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 CATSPER2Q96P56 530 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 SPACA5Q96QH8 159 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 METTL26Q96S19 204 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 TBL1YQ9BQ87 522 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 TMEM131Q92545 1883 aa3.16□□□□□ -1.9
UPF3B-203ENST00000478840 CENPVL3A0A0U1RRI6 287 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 TRPC5OSA6NMA1 111 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 CENPBD1B2RD01 187 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 CLDN34H7C241 214 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 ENSAO43768 121 aaKnown RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 NDUFS6O75380 124 aaKnown RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 GP1BAP07359 652 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 IL1RNP18510 177 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 MAGEA6P43360 314 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 MAP3K7CLP57077 242 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 CD164Q04900 197 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 TRDNQ13061 729 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 TPBGQ13641 420 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 LINC00303Q3SY05 128 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 HBMQ6B0K9 141 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 CLEC19AQ6UXS0 136 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 SPATA24Q86W54 205 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 SLC25A29Q8N8R3 303 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 OR5T1Q8NG75 326 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 OR4K2Q8NGD2 314 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 OR13G1Q8NGZ3 307 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 ZNF461Q8TAF7 563 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 OR10C1Q96KK4 312 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 ZNF285Q96NJ3 590 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 OR2M4Q96R27 311 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 RNF5Q99942 180 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 MED10Q9BTT4 135 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 BBS2Q9BXC9 721 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 NXF2Q9GZY0 626 aaKnown RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 ZNHIT6Q9NWK9 470 aaKnown RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 ENOPH1Q9UHY7 261 aa3.15□□□□□ -1.91
UPF3B-203ENST00000478840 FARSAQ9Y285 508 aaKnown RBP3.15□□□□□ -1.91
UPF3B-203ENST00000478840 A0A1B0GX12 115 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 CCNKO75909 580 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OR4Q2P0C623 313 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 TEAD1P28347 426 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 PPP1CAP62136 330 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 GRB2P62993 217 aaKnown RBP3.14□□□□□ -1.91
UPF3B-203ENST00000478840 C5orf47Q569G3 176 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 FAM71E1Q6IPT2 247 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 LRRC6Q86X45 466 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 NECAP1Q8NC96 275 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 ZNF738Q8NE65 137 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OR8G5Q8NG78 346 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OR7G1Q8NGA0 311 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OR4K17Q8NGC6 315 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OR5M1Q8NGP8 315 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 PHF10Q8WUB8 498 aaKnown RBP3.14□□□□□ -1.91
UPF3B-203ENST00000478840 HBEGFQ99075 208 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 ABCB9Q9NP78 766 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 STX18Q9P2W9 335 aaKnown RBP3.14□□□□□ -1.91
UPF3B-203ENST00000478840 OPN4Q9UHM6 478 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 URGCP-MRPS24S4R325 110 aa3.14□□□□□ -1.91
UPF3B-203ENST00000478840 LRPPRCP42704 1394 aaKnown RBP3.13□□□□□ -1.91
UPF3B-203ENST00000478840 IGKV6D-41A0A0C4DH26 115 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 KIR2DS1A0A191URI9 304 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 TMEM72A0PK05 275 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 OR2AT4A6NND4 320 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 CRXO43186 299 aaPredicted RBP3.13□□□□□ -1.91
UPF3B-203ENST00000478840 CDK14O94921 469 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 ZNF806P0C7X5 589 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 NELFEP18615 380 aaKnown RBP3.13□□□□□ -1.91
UPF3B-203ENST00000478840 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
UPF3B-203ENST00000478840 HTR2BP41595 481 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 PFN3P60673 137 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 ADIGQ0VDE8 80 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 CDC20Q12834 499 aa3.13□□□□□ -1.91
UPF3B-203ENST00000478840 PMS2P3Q13401 168 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms