RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 EGFL6Q8IUX8 553 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 CMTM4Q8IZR5 234 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 PRSS35Q8N3Z0 413 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 Q8N7P7 452 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 C3orf56Q8N813 242 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 NPRL2Q8WTW4 380 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 NRIP2Q9BQI9 281 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 PKIBQ9C010 78 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 S100A14Q9HCY8 104 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 GPR173Q9NS66 373 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 POLDIP2Q9Y2S7 368 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 POMT1Q9Y6A1 747 aa19.27■□□□□ 0.68
C9orf3-215ENST00000478473 ANKRD61A6NGH8 418 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 HOXA3O43365 443 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-215ENST00000478473 HAAOP46952 286 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 GMFBP60983 142 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 ERVK11-1P61568 191 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 VMO1Q7Z5L0 202 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 TNFRSF14Q92956 283 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 LHX4Q969G2 390 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 MBOAT4Q96T53 435 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 C9orf16Q9BUW7 83 aa19.26■□□□□ 0.67
C9orf3-215ENST00000478473 EXOGQ9Y2C4 368 aaKnown RBP19.26■□□□□ 0.67
C9orf3-215ENST00000478473 NBEAL1Q6ZS30 2694 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 TRBV23-1A0A0A0MS06 115 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 M0R1W7 72 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 SYT7O43581 403 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 SYNGR1O43759 233 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 UBCP0CG48 685 aaKnown RBP19.25■□□□□ 0.67
C9orf3-215ENST00000478473 IL24Q13007 206 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 SMIM21Q3B7S5 101 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 LDLRAD3Q86YD5 345 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 ZNF747Q9BV97 191 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 CHST5Q9GZS9 411 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 PCDHGB1Q9Y5G3 927 aa19.25■□□□□ 0.67
C9orf3-215ENST00000478473 TFF1P04155 84 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 ISG15P05161 165 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 MELTFP08582 738 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 KIR3DL2P43630 455 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 UBE2V2Q15819 145 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 ZIK1Q3SY52 487 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-215ENST00000478473 CALHM1Q8IU99 346 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 PQLC1Q8N2U9 271 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 PIP4P2Q8N4L2 257 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 ZNRF1Q8ND25 227 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 OR2G2Q8NGZ5 317 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 ZDHHC16Q969W1 377 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 RNFT2Q96EX2 444 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 SLC29A1Q99808 456 aa19.24■□□□□ 0.67
C9orf3-215ENST00000478473 SNTNA6NMZ2 147 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 RPL15P61313 204 aaKnown RBP19.23■□□□□ 0.67
C9orf3-215ENST00000478473 GUCA2AQ02747 115 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 TP53I3Q53FA7 332 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 FAM220AQ7Z4H9 259 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 ZNF561Q8N587 486 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 ACBD7Q8N6N7 88 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 CD177Q8N6Q3 437 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 RHOXF1Q8NHV9 184 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 ONECUT1Q9UBC0 465 aa19.23■□□□□ 0.67
C9orf3-215ENST00000478473 A6NIN4 97 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 RFPL4AA6NLU0 287 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 POM121CA8CG34 1229 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 RFPL4AL1F8VTS6 287 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 RNASEK-C17orf49H0YIS7 233 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 SLC16A6O15403 523 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 MPZL2O60487 215 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 GATBO75879 557 aaKnown RBP19.22■□□□□ 0.67
C9orf3-215ENST00000478473 GABRA2P47869 451 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 CCR9P51686 369 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 TMEM244Q5VVB8 128 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 ENTHD1Q8IYW4 607 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 DNAAF1Q8NEP3 725 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 SSMEM1Q8WWF3 244 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 PP6455Q8WZ26 134 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 H1FXQ92522 213 aaKnown RBP19.22■□□□□ 0.67
C9orf3-215ENST00000478473 METTL8Q9H825 291 aaKnown RBP19.22■□□□□ 0.67
C9orf3-215ENST00000478473 PLEKHA1Q9HB21 404 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 SEBOXQ9HB31 216 aaPredicted RBP19.22■□□□□ 0.67
C9orf3-215ENST00000478473 MRPS18AQ9NVS2 196 aaKnown RBP19.22■□□□□ 0.67
C9orf3-215ENST00000478473 GNG8Q9UK08 70 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 SLC7A11Q9UPY5 501 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 GMPPBQ9Y5P6 360 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 MMP24Q9Y5R2 645 aa19.22■□□□□ 0.67
C9orf3-215ENST00000478473 LOC107986453A0A1B0GWG9 222 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 NDUFB7P17568 137 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 PRDX2P32119 198 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 FUT6P51993 359 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 ZBTB49Q6ZSB9 765 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 LGALS12Q96DT0 336 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 ZNF488Q96MN9 340 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 ADI1Q9BV57 179 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 FRRS1LQ9P0K9 344 aa19.21■□□□□ 0.67
C9orf3-215ENST00000478473 IGKV1-27A0A075B6S5 117 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 A0A0U1RQK1 487 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 DAPL1A0PJW8 107 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 KNG1P01042 644 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 OR12D2P58182 307 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 ODF4Q2M2E3 257 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 NCR3LG1Q68D85 454 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 UTS2BQ765I0 119 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms