RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 Q6YL49 198 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 C1orf122Q6ZSJ8 110 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 SLC25A28Q96A46 364 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 DUX5Q96PT3 197 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 ACOXLQ9NUZ1 547 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 POLDIP2Q9Y2S7 368 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 PCDHGB1Q9Y5G3 927 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 GMPPBQ9Y5P6 360 aa17.91■□□□□ 0.46
COL9A3-211ENST00000477612 IGHV1-69DA0A0B4J2H0 117 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 MDFIC2A0A1B0GVS7 189 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 ANKRD61A6NGH8 418 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 A6NIN4 97 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 IGHV1-69P01742 117 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 KIR3DL2P43630 455 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 TP53I3Q53FA7 332 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 AWAT1Q58HT5 328 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 RUSC1-AS1Q66K80 236 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 ZBTB49Q6ZSB9 765 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 FAM220AQ7Z4H9 259 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 EGFL6Q8IUX8 553 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 Q8N7P7 452 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 RHOXF1Q8NHV9 184 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 LHX4Q969G2 390 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 PKIBQ9C010 78 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 HES4Q9HCC6 221 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 GNG8Q9UK08 70 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 DSCAML1Q8TD84 2053 aa17.9■□□□□ 0.46
COL9A3-211ENST00000477612 HAX1O00165 279 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 MPZL2O60487 215 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 TFF1P04155 84 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ISG15P05161 165 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 UBCP0CG48 685 aaKnown RBP17.89■□□□□ 0.45
COL9A3-211ENST00000477612 GABRA2P47869 451 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ERVK11-1P61568 191 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 UBE2V2Q15819 145 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ODF4Q2M2E3 257 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 SMIM21Q3B7S5 101 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 VMO1Q7Z5L0 202 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 CALHM1Q8IU99 346 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ENTHD1Q8IYW4 607 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 CMTM4Q8IZR5 234 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ACBD7Q8N6N7 88 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ZNRF1Q8ND25 227 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 OR2G2Q8NGZ5 317 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 NRIP2Q9BQI9 281 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 ADI1Q9BV57 179 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 CHST5Q9GZS9 411 aa17.89■□□□□ 0.45
COL9A3-211ENST00000477612 UNKLQ9H9P5 680 aaKnown RBP17.89■□□□□ 0.45
COL9A3-211ENST00000477612 LOC100130705A0A1B0GUX0 176 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 DAPL1A0PJW8 107 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 SLC16A6O15403 523 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 HOXA3O43365 443 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-211ENST00000477612 IL24Q13007 206 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 TMEM244Q5VVB8 128 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 C16orf87Q6PH81 154 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 TMEM86BQ8N661 226 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 NPRL2Q8WTW4 380 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 ZDHHC16Q969W1 377 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 ZNF488Q96MN9 340 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 PLEKHA1Q9HB21 404 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 FRRS1LQ9P0K9 344 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 AASSQ9UDR5 926 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 SLC7A11Q9UPY5 501 aa17.88■□□□□ 0.45
COL9A3-211ENST00000477612 TRBV23-1A0A0A0MS06 115 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 LOC107986453A0A1B0GWG9 222 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 RFPL4AA6NLU0 287 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 RFPL4AL1F8VTS6 287 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 M0R1W7 72 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 GATBO75879 557 aaKnown RBP17.87■□□□□ 0.45
COL9A3-211ENST00000477612 CCR9P51686 369 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 FUT6P51993 359 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 OR12D2P58182 307 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 ZNF561Q8N587 486 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 CD177Q8N6Q3 437 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 C3orf56Q8N813 242 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 PP6455Q8WZ26 134 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 H1FXQ92522 213 aaKnown RBP17.87■□□□□ 0.45
COL9A3-211ENST00000477612 TNFRSF14Q92956 283 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 LGALS12Q96DT0 336 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 Q96MT0 163 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 MRPS18AQ9NVS2 196 aaKnown RBP17.87■□□□□ 0.45
COL9A3-211ENST00000477612 FAM118AQ9NWS6 357 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 ONECUT1Q9UBC0 465 aa17.87■□□□□ 0.45
COL9A3-211ENST00000477612 SERPINA3P01011 423 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 MELTFP08582 738 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 DBTP11182 482 aaKnown RBP17.86■□□□□ 0.45
COL9A3-211ENST00000477612 NDUFB7P17568 137 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 PRDX2P32119 198 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 GUCA2AQ02747 115 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 ZNF91Q05481 1191 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 ANGPTL5Q86XS5 388 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 RDH10Q8IZV5 341 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 RDH12Q96NR8 316 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 MYCBPQ99417 103 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-211ENST00000477612 ZNF649Q9BS31 505 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 POMT1Q9Y6A1 747 aa17.86■□□□□ 0.45
COL9A3-211ENST00000477612 IGKV1-27A0A075B6S5 117 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 RNASEK-C17orf49H0YIS7 233 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 IGHA1P01876 353 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 NANOS3P60323 173 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms