RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CCDC22O60826 627 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 INMTO95050 263 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 DUS4LO95620 317 aaKnown RBP5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 CST4P01036 141 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 GASTP01350 101 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 LPLP06858 475 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 H2AFXP16104 143 aaPredicted RBP5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 PRDX2P32119 198 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 DCTDP32321 178 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 OPRL1P41146 370 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 HAAOP46952 286 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 RAB25P57735 213 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 RPS7P62081 194 aaKnown RBP5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 EDDM3AQ14507 147 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 CEACAM21Q3KPI0 293 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 LINC01559Q495D7 138 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 ABCA11PQ4W5N1 156 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF684Q5T5D7 378 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 GDPD3Q7L5L3 318 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 PRSS45Q7RTY3 260 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 KRT77Q7Z794 578 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 TRAPPC6BQ86SZ2 158 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 Q8N2B8 174 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 IQCF1Q8N6M8 205 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF676Q8N7Q3 588 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 AQP11Q8NBQ7 271 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 TEX47Q8TBZ9 253 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 AQP3Q92482 292 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 STMN2Q93045 179 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 MYDGFQ969H8 173 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 MALSU1Q96EH3 234 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 SDSLQ96GA7 329 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 LYZL4Q96KX0 146 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 BTBD10Q9BSF8 475 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 TTTY10Q9BZA0 68 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 WNT10AQ9GZT5 417 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 OR51I2Q9H344 312 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 NIPAL2Q9H841 368 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 IL1RAPQ9NPH3 570 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 RASL12Q9NYN1 266 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 ABCD2Q9UBJ2 740 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 CD300AQ9UGN4 299 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 BAIAP2Q9UQB8 552 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 LRP12Q9Y561 859 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 PCDHGB5Q9Y5G0 923 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 U3KQV3 271 aa5.37□□□□□ -1.55
RTFDC1-206ENST00000477485 SH2D7A6NKC9 451 aaPredicted RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 OR5B21A6NL26 309 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 NUDT19A8MXV4 375 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ARPC2O15144 300 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 MTRF1O75570 445 aaKnown RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 DNAJC8O75937 253 aaPredicted RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 TK1P04183 234 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF728P0DKX0 622 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 CD24P25063 80 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 PSMA6P60900 246 aaKnown RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ACTA2P62736 377 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ACTG2P63267 376 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ACTC1P68032 377 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ACTA1P68133 377 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 CD83Q01151 205 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 COL10A1Q03692 680 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 DCTN2Q13561 401 aaKnown RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ZNF626Q68DY1 528 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 C10orf99Q6UWK7 81 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 UNQ9370/PRO34162Q6UXP9 181 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 HACD2Q6Y1H2 254 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 RASSF6Q6ZTQ3 369 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ASRGL1Q7L266 308 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 RNF144BQ7Z419 303 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 PIGWQ7Z7B1 504 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 POC1AQ8NBT0 407 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 OR51D1Q8NGF3 324 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 OR5A2Q8NGI9 324 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 CMTM5Q96DZ9 223 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 AKR1E2Q96JD6 320 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 GPR61Q9BZJ8 451 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 NMNAT2Q9BZQ4 307 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 GORASP2Q9H8Y8 452 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 VIPAS39Q9H9C1 493 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 INPP5EQ9NRR6 644 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 GPR173Q9NS66 373 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ARGLU1Q9NWB6 273 aaPredicted RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 IL20Q9NYY1 176 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 LAMP5Q9UJQ1 280 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 PIGLQ9Y2B2 252 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 POLDIP2Q9Y2S7 368 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 KIAA2026Q5HYC2 2103 aa5.36□□□□□ -1.55
RTFDC1-206ENST00000477485 FAM172BPA6NC97 362 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 A6NIN4 97 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 FAM90A8PA6NJQ4 464 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 C17orf98A8MV24 154 aa5.35□□□□□ -1.55
RTFDC1-206ENST00000477485 ODF3BA8MYP8 253 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms