RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	SLC7A11	Q9UPY5	501 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334	ACOT9	Q9Y305	439 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334	KLF12	Q9Y4X4	402 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334	HES2	Q9Y543	173 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334	WIF1	Q9Y5W5	379 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334	GPR179	Q6PRD1	2367 aa		2.29	□□□□□ -2.04
RBM39-231	ENST00000477334		A0A0J9YXV3	536 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	ZNF593	O00488	134 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	BPY2	O14599	106 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	CRX	O43186	299 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	SGCE	O43556	437 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	RAD1	O60671	282 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	CTNS	O60931	367 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	NIPSNAP2	O75323	286 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	RD3L	P0DJH9	198 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	THRA	P10827	490 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	PSMB6	P28072	239 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	RPA3	P35244	121 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	P2RY2	P41231	377 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	GALR1	P47211	349 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	CXCL12	P48061	93 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	UBE2E1	P51965	193 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	PLTP	P55058	493 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	MLF1	P58340	268 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	IL5RA	Q01344	420 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	SLAMF1	Q13291	335 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	PIGH	Q14442	188 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	BSX	Q3C1V8	233 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	KRTAP13-2	Q52LG2	175 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	AVPI1	Q5T686	147 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	HBM	Q6B0K9	141 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	BHLHA15	Q7RTS1	189 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	MDP1	Q86V88	176 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	NKAIN4	Q8IVV8	208 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	ZNF738	Q8NE65	137 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	OR6N1	Q8NGY5	312 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	OR10G6	Q8NH81	332 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	LINC01560	Q8TB33	94 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	CIRBP-AS1	Q8TBR5	109 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	SFXN5	Q8TD22	340 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	TNFRSF14	Q92956	283 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	TMEM159	Q96B96	161 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	PPWD1	Q96BP3	646 aa	Known RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	UBE2E2	Q96LR5	201 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	ALS2CR12	Q96Q35	445 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	TEAD3	Q99594	435 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	DOK1	Q99704	481 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	HSD17B10	Q99714	261 aa	Known RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	PLEKHA1	Q9HB21	404 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	ABCB9	Q9NP78	766 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	IFT46	Q9NQC8	304 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	SLC22A14	Q9Y267	594 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	AK9	Q5TCS8	1911 aa		2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	COL27A1	Q8IZC6	1860 aa	Predicted RBP	2.28	□□□□□ -2.04
RBM39-231	ENST00000477334	ANKRD12	Q6UB98	2062 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PCDH11X	Q9BZA7	1347 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IGLV3-12	A0A075B6K2	115 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	SMIM26	A0A096LP01	95 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334		A0A0A6YYH2	397 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IGHV1OR15-9	A0A0B4J2B8	117 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IGHV1-69D	A0A0B4J2H0	117 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC5A10	A0PJK1	596 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	C5orf63	A6NC05	138 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334		A6NJ64	397 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF850	A8MQ14	1090 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334		H0YJW9	148 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TNFRSF11B	O00300	401 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MANBA	O00462	879 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PLPP3	O14495	311 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	LIN7A	O14910	233 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TCAP	O15273	167 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	AQP9	O43315	295 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	CBR3	O75828	277 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MYO1D	O94832	1006 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IL4	P05112	153 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	CTSL	P07711	333 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MMP7	P09237	267 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC35E2B	P0CK96	405 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	HSPD1	P10809	573 aa	Known RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	CEL	P19835	753 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	APLNR	P35414	380 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TUFM	P49411	452 aa	Known RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PSMB2	P49721	201 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	BLVRA	P53004	296 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	OR12D2	P58182	307 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	IFITM3	Q01628	133 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PRKCD	Q05655	676 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF816	Q0VGE8	651 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	NAB1	Q13506	487 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TPBG	Q13641	420 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	OR1Q1	Q15612	314 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TRAM1	Q15629	374 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	TRIP13	Q15645	432 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	SYT6	Q5T7P8	510 aa	Predicted RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	HHAT	Q5VTY9	493 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	PTRHD1	Q6GMV3	140 aa	Known RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	EPGN	Q6UW88	154 aa		2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	MRPL52	Q86TS9	123 aa	Known RBP	2.27	□□□□□ -2.05
RBM39-231	ENST00000477334	BOD1L2	Q8IYS8	172 aa		2.27	□□□□□ -2.05

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