RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZNF133P52736 654 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 CRISP1P54107 249 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 MTCP1P56278 107 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RAB25P57735 213 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ZNF121P58317 390 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 RHOAP61586 193 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 STXBP1P61764 594 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 RPL8P62917 257 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 HBA1P69905 142 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 BTN3A2P78410 334 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 IFITM3Q01628 133 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PAX2Q02962 417 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PAX8Q06710 450 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 UBE2V1Q13404 147 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 EXOSC2Q13868 293 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 ZNF235Q14590 738 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SLC10A1Q14973 349 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 CDKN3Q16667 212 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RPEL1Q2QD12 228 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RAB6CQ53S08 254 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 CYBRD1Q53TN4 286 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TMEM128Q5BJH2 165 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ACTL10Q5JWF8 245 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ELFN2Q5R3F8 820 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 FAM74A1Q5RGS3 127 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TMEM78Q5T7P6 136 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 FAM166AQ6J272 317 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PRR27Q6MZM9 219 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TOMM20LQ6UXN7 152 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 IZUMO2Q6UXV1 221 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 Q6ZT83 130 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 LANCL3Q6ZV70 420 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 HIST3H2AQ7L7L0 130 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 GLT6D1Q7Z4J2 308 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 GOLGA7Q7Z5G4 137 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 HSD17B13Q7Z5P4 300 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 DEFB128Q7Z7B8 93 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 NIT1Q86X76 327 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 DOLPP1Q86YN1 238 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 H1FOOQ8IZA3 346 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 C8orf59Q8N0T1 100 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 GCSAMQ8N6F7 178 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 Q8NBF4 154 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 MDS2Q8NDY4 140 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SLC30A7Q8NEW0 376 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR5AU1Q8NGC0 362 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR52E4Q8NGH9 312 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR10Q1Q8NGQ4 319 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR6K2Q8NGY2 324 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR5J2Q8NH18 312 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR4C6Q8NH72 309 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR56B4Q8NH76 319 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR1F12Q8NHA8 337 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TERB2Q8NHR7 220 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ZNF519Q8TB69 540 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TNFAIP8L1Q8WVP5 186 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PCNPQ8WW12 178 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 CYGBQ8WWM9 190 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 LCN9Q8WX39 176 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ASB13Q8WXK3 278 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR5P2Q8WZ92 322 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RAB8BQ92930 207 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 UCN3Q969E3 161 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 HIST1H2BAQ96A08 127 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 APOBEC3DQ96AK3 386 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 GALMQ96C23 342 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ROPN1LQ96C74 230 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ISOC1Q96CN7 298 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SMIM19Q96E16 107 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SEH1LQ96EE3 360 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 MRPL53Q96EL3 112 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 CENPNQ96H22 339 aaPredicted RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 HPDLQ96IR7 371 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TSSK2Q96PF2 358 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 MS4A10Q96PG2 267 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 OR52B2Q96RD2 323 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 CPXM1Q96SM3 734 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 P2RX4Q99571 388 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TBX5Q99593 518 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 CMSS1Q9BQ75 279 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 GINS3Q9BRX5 216 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 NUDT9Q9BW91 350 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SLC39A8Q9C0K1 460 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 VN1R1Q9GZP7 353 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RAB6CQ9H0N0 254 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 DEFB129Q9H1M3 183 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ABCG5Q9H222 651 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PPDPFQ9H3Y8 114 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 RHOJQ9H4E5 214 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 CST9LQ9H4G1 147 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 ZDHHC11Q9H8X9 412 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 EFCAB1Q9HAE3 211 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 SPANXA1Q9NS26 97 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 TMEM38BQ9NVV0 291 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 DUS2Q9NX74 493 aaKnown RBP2.03□□□□□ -2.08
XRN1-211ENST00000477237 MED11Q9P086 117 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 IL17CQ9P0M4 197 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 VPS29Q9UBQ0 182 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 B4GALT7Q9UBV7 327 aa2.03□□□□□ -2.08
XRN1-211ENST00000477237 PILRBQ9UKJ0 227 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms