RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TRIM63Q969Q1 353 aa24.58■■□□□ 1.53
VEGFA-211ENST00000476772 PLPPR2Q96GM1 343 aa24.58■■□□□ 1.53
VEGFA-211ENST00000476772 URM1Q9BTM9 101 aaKnown RBP24.58■■□□□ 1.53
VEGFA-211ENST00000476772 SELENOIQ9C0D9 397 aa24.58■■□□□ 1.53
VEGFA-211ENST00000476772 CA10Q9NS85 328 aa24.58■■□□□ 1.53
VEGFA-211ENST00000476772 IL36GQ9NZH8 169 aa24.58■■□□□ 1.53
VEGFA-211ENST00000476772 IGLV3-9A0A075B6K5 115 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 CLDN14O95500 239 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 CSTBP04080 98 aaKnown RBP24.57■■□□□ 1.52
VEGFA-211ENST00000476772 RGS21Q2M5E4 152 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 HAGHLQ6PII5 290 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF573Q86YE8 665 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF843Q8N446 348 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 SMIM4Q8WVI0 70 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 YIPF5Q969M3 257 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 MRPL37Q9BZE1 423 aaKnown RBP24.57■■□□□ 1.52
VEGFA-211ENST00000476772 SLC22A4Q9H015 551 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 OR51I2Q9H344 312 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 ATP23Q9Y6H3 246 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 CFAP46Q8IYW2 2715 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 HCFC1P51610 2035 aa24.57■■□□□ 1.52
VEGFA-211ENST00000476772 WIPF3A6NGB9 483 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 GSTZ1O43708 216 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF780AO75290 641 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SFTPBP07988 381 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 CD3GP09693 182 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SCN1BQ07699 218 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 GPR176Q14439 515 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 OR51T1Q8NGJ9 327 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 C15orf40Q8WUR7 153 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SLAMF9Q96A28 289 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 TBC1D24Q9ULP9 559 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 LINC00854A0A1B0GVQ3 168 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 TUBAL3A6NHL2 446 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SYNGR1O43759 233 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SCGNO76038 276 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 AGAP20933 346 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 SAXO1Q8IYX7 474 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 BATF2Q8N1L9 274 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF808Q8N4W9 903 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-211ENST00000476772 POC5Q8NA72 575 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 OR10R2Q8NGX6 335 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 OR13G1Q8NGZ3 307 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 GTF3AQ92664 365 aaKnown RBP24.56■■□□□ 1.52
VEGFA-211ENST00000476772 TM2D1Q9BX74 207 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 EPG5Q9HCE0 2579 aa24.56■■□□□ 1.52
VEGFA-211ENST00000476772 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-211ENST00000476772 GABARAPH6UMI1 98 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 SOCS1O15524 211 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 CHRM2P08172 466 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 GTF2F2P13984 249 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 NPBWR2P48146 333 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 FAM189A2Q15884 450 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 FAM76BQ5HYJ3 339 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 C19orf18Q8NEA5 215 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 OR52I2Q8NH67 350 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 MRPL24Q96A35 216 aaKnown RBP24.55■■□□□ 1.52
VEGFA-211ENST00000476772 ZMAT3Q9HA38 289 aaKnown RBP24.55■■□□□ 1.52
VEGFA-211ENST00000476772 NPDC1Q9NQX5 325 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-211ENST00000476772 POU2F3Q9UKI9 436 aa24.55■■□□□ 1.52
VEGFA-211ENST00000476772 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-211ENST00000476772 A0A1B0GWJ7 208 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 MEIOCA2RUB1 952 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 LRP5LA4QPB2 252 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 C1QL1O75973 258 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 MRPS10P82664 201 aaKnown RBP24.54■■□□□ 1.52
VEGFA-211ENST00000476772 DMRTC2Q8IXT2 367 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-211ENST00000476772 MKXQ8IYA7 352 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 FAM89BQ8N5H3 189 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 CHST4Q8NCG5 386 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 OR56B1Q8NGI3 324 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 Q96M66 194 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 OCEL1Q9H607 264 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF442Q9H7R0 627 aa24.54■■□□□ 1.52
VEGFA-211ENST00000476772 F5H5P2 479 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 BCL3P20749 454 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 RTN4RL2Q86UN3 420 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 TMEM200AQ86VY9 491 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 NUDT16L1Q9BRJ7 211 aaKnown RBP24.53■■□□□ 1.52
VEGFA-211ENST00000476772 PKIBQ9C010 78 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 CXXC4Q9H2H0 198 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 NKIRAS2Q9NYR9 191 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 MTCH1Q9NZJ7 389 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 TAAR3PQ9P1P4 343 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 ADGRG4Q8IZF6 3080 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 IGHV3-64DA0A0J9YX35 117 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 TMEM210A6NLX4 147 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 SHISA9B4DS77 424 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 J3QT63 122 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 CYB5AP00167 134 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 CPT2P23786 658 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 MPZP25189 248 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 INPP1P49441 399 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 DEFA1P59665 94 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 DEFA3P59666 94 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF154Q13106 437 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 ZNF260Q3ZCT1 412 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 OSR2Q8N2R0 312 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 FCAMRQ8WWV6 532 aa24.53■■□□□ 1.52
VEGFA-211ENST00000476772 ELF5Q9UKW6 265 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms