RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TCEAL2Q9H3H9 227 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 MED20Q9H944 212 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 CDH20Q9HBT6 801 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SGK2Q9HBY8 427 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 NOX4Q9NPH5 578 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 DMAC2Q9NW81 257 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 ASB6Q9NWX5 421 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC23A2Q9UGH3 650 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 SS18L2Q9UHA2 77 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 PSG8Q9UQ74 426 aa5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 YARS2Q9Y2Z4 477 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-215ENST00000475319 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM129A0AVI4 362 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 GXYLT2A0PJZ3 443 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 NPIPB15A6NHN6 443 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 C3orf70A6NLC5 250 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 J3QR89 54 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 DCTN6O00399 190 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 AGPAT2O15120 278 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 LRP3O75074 770 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 DUSP11O75319 330 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 IGHG4P01861 327 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 WNT1P04628 370 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 OR4Q2P0C623 313 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 EPCAMP16422 314 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 GABRA3P34903 492 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SULT1A2P50226 295 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 UCP2P55851 309 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 ZFP36L1Q07352 338 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 DHRS2Q13268 280 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 GNMTQ14749 295 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 QRICH1Q2TAL8 776 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 ACOT6Q3I5F7 207 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 CEACAM21Q3KPI0 293 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 CCSMST1Q4G0I0 132 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 ATP6AP1LQ52LC2 224 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 TMEM41BQ5BJD5 291 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 PAGE3Q5JUK9 113 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 ABHD17BQ5VST6 288 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 TNFAIP8L2Q6P589 184 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC16A9Q7RTY1 509 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 DOLPP1Q86YN1 238 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 OR8I2Q8N0Y5 310 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 TCTEX1D1Q8N7M0 179 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 PTGR2Q8N8N7 351 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 AMER3Q8N944 861 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 LFNGQ8NES3 379 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 OR2Y1Q8NGV0 311 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 OR5K2Q8NHB8 316 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 HAVCR2Q8TDQ0 301 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SECTM1Q8WVN6 248 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 RERGQ96A58 199 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 GALMQ96C23 342 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 MS4A6EQ96DS6 147 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SIGLEC12Q96PQ1 595 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF649Q9BS31 505 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 PLA2G12BQ9BX93 195 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 OR11A1Q9GZK7 315 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 WDR13Q9H1Z4 485 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC32A1Q9H598 525 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 POMKQ9H5K3 350 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 BEX1Q9HBH7 125 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 AMBNQ9NP70 447 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC25A10Q9UBX3 287 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 CRLS1Q9UJA2 301 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC17A4Q9Y2C5 497 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 NTNG1Q9Y2I2 539 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 WIPI2Q9Y4P8 454 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 TSSC4Q9Y5U2 329 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 DDX60LQ5H9U9 1706 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 SCN9AQ15858 1988 aa5.25□□□□□ -1.57
ECHDC1-215ENST00000475319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 A0A1B0GU03 582 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 ASPDHA6ND91 283 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 H0Y980 276 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 M0QXV9 152 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 M0QZQ0 153 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 TAAR5O14804 337 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 TNFSF14O43557 240 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 SLC16A8O95907 504 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 CD160O95971 181 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 CFIP05156 583 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 SERPINA7P05543 415 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 CTSDP07339 412 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 CXCL1P09341 107 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 MPC1LP0DKB6 136 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 ARL2P36404 184 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 PNPLA4P41247 253 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 GLIPR1P48060 266 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 RND2P52198 227 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 MFAP4P55083 255 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 UBE2NP61088 152 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 PAFAH1B2P68402 229 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 RUNX1Q01196 453 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 LY6KQ17RY6 165 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 FAM78BQ5VT40 261 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF776Q68DI1 518 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
ECHDC1-215ENST00000475319 ZNF534Q76KX8 674 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms