RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ASGR1P07306 291 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PPIAL4FP0DN26 164 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PPIAL4GP0DN37 164 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 FAHP16930 419 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 HRH1P35367 487 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PSMB10P40306 273 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 RPL29P47914 159 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 FUT7Q11130 342 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 P2RY6Q15077 328 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 NSDHLQ15738 373 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TDRG1Q3Y452 100 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 ARSJQ5FYB0 599 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 LILRA6Q6PI73 481 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 BATF2Q8N1L9 274 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 OR14L1PQ8NHC6 308 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 C1orf216Q8TAB5 229 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 LURAP1Q96LR2 239 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TAAR6Q96RI8 345 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CSTL1Q9H114 145 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 S1PR5Q9H228 398 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 LYRM2Q9NU23 88 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 IL36GQ9NZH8 169 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 OR6C3Q9NZP0 311 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 H2AFY2Q9P0M6 372 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 B3GAT1Q9P2W7 334 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 ST3GAL6Q9Y274 331 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 MRPS16Q9Y3D3 137 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 R4GMQ9 66 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 RAI1Q7Z5J4 1906 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 A0A1W2PNV4 684 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 DUXBA0A1W2PPF3 345 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 IGSF23A1L1A6 192 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 IGLON5A6NGN9 336 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 F5H0A9 414 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 OIP5O43482 229 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TUSC2O75896 110 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CXCL10P02778 98 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 OPN1MWP04001 364 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 S100A9P06702 114 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 MRPL3P09001 348 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 ZNF806P0C7X5 589 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CT45A8P0DMV1 189 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CT45A9P0DMV2 189 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 OPN1MW2P0DN77 364 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 OPN1MW3P0DN78 364 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 RPL12P30050 165 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 ELLP55199 621 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 FAM110CQ1W6H9 321 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 HYAL4Q2M3T9 481 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CT45A2Q5DJT8 189 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 ARHGAP40Q5TG30 622 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TMEM42Q69YG0 159 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 ANGPTL8Q6UXH0 198 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TCEAL8Q8IYN2 117 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 GCNT2Q8N0V5 402 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 SLC26A10Q8NG04 563 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 KCNK17Q96T54 332 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 FAAP24Q9BTP7 215 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CRLS1Q9UJA2 301 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PUS1Q9Y606 427 aaKnown RBP eCLIP3.55□□□□□ -1.84
USP16-205ENST00000474835 IGHV2-26A0A0B4J1V2 119 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 IGHV2OR16-5A0A0B4J2B6 119 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 A6NIZ1 184 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 DUXAA6NLW8 204 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 E9PLN8 166 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TSTD3H0UI37 97 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 M0R143 59 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 SMPD2O60906 423 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TTRP02766 147 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 HIST1H1DP16402 221 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 AKR1C3P42330 323 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 INPP1P49441 399 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CLDN6P56747 220 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 KLF3P57682 345 aaPredicted RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 CLDN2P57739 230 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 TGM3Q08188 693 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 HSPB3Q12988 150 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 SLC25A53Q5H9E4 307 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 GGNBP1Q5YKI7 109 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 RPUSD3Q6P087 351 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 KCTD9Q7L273 389 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 CALHM1Q8IU99 346 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 DCUN1D4Q92564 292 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 GAL3ST3Q96A11 431 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 GPR87Q9BY21 358 aa3.55□□□□□ -1.84
USP16-205ENST00000474835 PARP12Q9H0J9 701 aaKnown RBP3.55□□□□□ -1.84
USP16-205ENST00000474835 TRBV6-6A0A0A6YYG2 114 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 GNG14A0A1W2PPG7 69 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RIIAD1A6NNX1 92 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 NPIPB11E5RHQ5 1161 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 H0YJW9 148 aa3.54□□□□□ -1.84
USP16-205ENST00000474835 RPLP1P05386 114 aaKnown RBP3.54□□□□□ -1.84
USP16-205ENST00000474835 OR10J4P0C629 311 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms