RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RNASE1P07998 156 aaKnown RBP14.77□□□□□ -0.05
UPF3A-203ENST00000474056 PGA5P0DJD9 388 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 NDUFB7P17568 137 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 ZBTB49Q6ZSB9 765 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 ZNF573Q86YE8 665 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 PDZD9Q8IXQ8 264 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 ENTHD1Q8IYW4 607 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 ZNRF1Q8ND25 227 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 C8orf46Q8TAG6 207 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 NPRL2Q8WTW4 380 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 GATAD2BQ8WXI9 593 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 PRDM13Q9H4Q3 707 aa14.77□□□□□ -0.05
UPF3A-203ENST00000474056 ELL3Q9HB65 397 aaPredicted RBP14.77□□□□□ -0.05
UPF3A-203ENST00000474056 IGHV1-69DA0A0B4J2H0 117 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 DAPL1A0PJW8 107 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 ANKRD61A6NGH8 418 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 CLDN34H7C241 214 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 HOXA3O43365 443 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-203ENST00000474056 IGHV1-69P01742 117 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 HKR1P10072 659 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 DLX1P56177 255 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 CAV3P56539 151 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 ACTC1P68032 377 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 ACTA1P68133 377 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 AWAT1Q58HT5 328 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 ANGPTL5Q86XS5 388 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 CALHM1Q8IU99 346 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 RDH10Q8IZV5 341 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 TMEM185AQ8NFB2 350 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 ZDHHC16Q969W1 377 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 SLC25A28Q96A46 364 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 SIRT7Q9NRC8 400 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 RASL12Q9NYN1 266 aa14.76□□□□□ -0.05
UPF3A-203ENST00000474056 RFPL4AA6NLU0 287 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 RFPL4AL1F8VTS6 287 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 UBCP0CG48 685 aaKnown RBP14.75□□□□□ -0.05
UPF3A-203ENST00000474056 MPZP25189 248 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 CEBPDP49716 269 aaPredicted RBP14.75□□□□□ -0.05
UPF3A-203ENST00000474056 OR12D2P58182 307 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 PRB3Q04118 309 aaPredicted RBP14.75□□□□□ -0.05
UPF3A-203ENST00000474056 ZNF91Q05481 1191 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 UBE2V2Q15819 145 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 SMIM21Q3B7S5 101 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 CD177Q8N6Q3 437 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 KIR3DL3Q8N743 410 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 Q8N7P7 452 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 OR2G2Q8NGZ5 317 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 TAF15Q92804 592 aaKnown RBP eCLIP14.75□□□□□ -0.05
UPF3A-203ENST00000474056 LGALS12Q96DT0 336 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 SDSLQ96GA7 329 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 DMRTB1Q96MA1 342 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 ADI1Q9BV57 179 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 CHST5Q9GZS9 411 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 EXOGQ9Y2C4 368 aaKnown RBP14.75□□□□□ -0.05
UPF3A-203ENST00000474056 POLDIP2Q9Y2S7 368 aa14.75□□□□□ -0.05
UPF3A-203ENST00000474056 IGKV1-27A0A075B6S5 117 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 LOC100130705A0A1B0GUX0 176 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 FAM230AA0A1W2PPH8 454 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 SNTNA6NMZ2 147 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 NOS1APO75052 506 aaPredicted RBP14.74□□□□□ -0.05
UPF3A-203ENST00000474056 BAG2O95816 211 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 DBTP11182 482 aaKnown RBP14.74□□□□□ -0.05
UPF3A-203ENST00000474056 NANOS3P60323 173 aaKnown RBP14.74□□□□□ -0.05
UPF3A-203ENST00000474056 Q6YL49 198 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 CMTM4Q8IZR5 234 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 ACBD7Q8N6N7 88 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 C3orf56Q8N813 242 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 CCDC54Q8NEL0 328 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 NRIP2Q9BQI9 281 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 HES4Q9HCC6 221 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 TNFRSF19Q9NS68 423 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 FRRS1LQ9P0K9 344 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 SLC7A11Q9UPY5 501 aa14.74□□□□□ -0.05
UPF3A-203ENST00000474056 A0A1W2PQ09 198 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 SLC16A6O15403 523 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 GATBO75879 557 aaKnown RBP14.73□□□□□ -0.05
UPF3A-203ENST00000474056 NXPH2O95156 264 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 MELTFP08582 738 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 HTR1AP08908 422 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 CAPZA1P52907 286 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 KLRD1Q13241 179 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 METAP1DQ6UB28 335 aaPredicted RBP14.73□□□□□ -0.05
UPF3A-203ENST00000474056 KCTD20Q7Z5Y7 419 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 RHOXF1Q8NHV9 184 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 ADAT3Q96EY9 351 aaPredicted RBP14.73□□□□□ -0.05
UPF3A-203ENST00000474056 C4orf36Q96KX1 117 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 PKIBQ9C010 78 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 AMBNQ9NP70 447 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 NOX4Q9NPH5 578 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 FAM118AQ9NWS6 357 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 MYRFQ9Y2G1 1151 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 PCDHGB1Q9Y5G3 927 aa14.73□□□□□ -0.05
UPF3A-203ENST00000474056 A0A0U1RQK1 487 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 J3QLW9 94 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 MPZL2O60487 215 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 ZNF19P17023 458 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 ERVK11-1P61568 191 aa14.72□□□□□ -0.05
UPF3A-203ENST00000474056 FOXL1Q12952 345 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms