RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NUDT21O43809 227 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SCO2O43819 266 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 AIREO43918 545 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FADS1O60427 444 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SRPX2O60687 465 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FMO6PO60774 539 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MRPS14O60783 128 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 NOL3O60936 208 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 NPIPB7O75200 414 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ALOX12BO75342 701 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 STX11O75558 287 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SERPINB7O75635 380 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SCRG1O75711 98 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SULT1C4O75897 302 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 OR2B3O76000 313 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CLPXO76031 633 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 OR7A10O76100 309 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 UTS2O95399 124 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RAB36O95755 333 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 IFNA14P01570 189 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 BGLAPP02818 100 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 GUSBP08236 651 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 QDPRP09417 244 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SBK2P0C263 348 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ASAH2BP0C7U1 165 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 HSMCR30P0CW71 290 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 COX6A1P12074 109 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CCL4P13236 92 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CD59P13987 128 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 HIST1H1CP16403 213 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF3P17036 446 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 DRD5P21918 477 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 GTF2E2P29084 291 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 HTR1FP30939 366 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 HOXA6P31267 233 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PYCR1P32322 319 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 EVI2BP34910 448 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 UGT2B10P36537 528 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ETV6P41212 452 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 NAA10P41227 235 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RBM34P42696 430 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SLC1A3P43003 542 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CRYBB2P43320 205 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RGS6P49758 472 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CCR4P51679 360 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ARHGDIAP52565 204 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RIDAP52758 137 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SMSP52788 366 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 HSD17B7P56937 341 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FBXW4P57775 412 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 OR10A3P58181 314 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CDC42P60953 191 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RPS11P62280 158 aaKnown RBP eCLIP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 BTG1P62324 171 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 LCN6P62502 163 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ERVK-25P63136 954 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PSPHP78330 225 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CCL7P80098 99 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FABP5Q01469 135 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF117Q03924 483 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MXD1Q05195 221 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SIGLEC14Q08ET2 396 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PLCXD2Q0VAA5 305 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ST3GAL3Q11203 375 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 STX4Q12846 297 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FOXF1Q12946 379 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MLLT11Q13015 90 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TNK1Q13470 666 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MADCAM1Q13477 382 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 KRR1Q13601 381 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 GNA13Q14344 377 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 GGTLC2Q14390 218 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 NCF4Q15080 339 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM44Q2T9K0 475 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TP53I3Q53FA7 332 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ARMCX4Q5H9R4 360 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 FAM27D1Q5T7N8 215 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ATAD3BQ5T9A4 648 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 LINC01590Q5TEZ4 76 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 LIPKQ5VXJ0 399 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MEDAGQ5VYS4 303 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 NXNL2Q5VZ03 156 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 AP1ARQ63HQ0 302 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 C22orf42Q6IC83 251 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 RHBDD2Q6NTF9 364 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PLBD1Q6P4A8 553 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TRAT1Q6PIZ9 186 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CD200R1LQ6Q8B3 271 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 WDR74Q6RFH5 385 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 SMARCD3Q6STE5 483 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF322Q6U7Q0 402 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 BTNL8Q6UX41 500 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CASP12Q6UXS9 341 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF730Q6ZMV8 503 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM91Q6ZNR0 172 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM182Q6ZP80 229 aaPredicted RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 PLEKHG7Q6ZR37 379 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 CPEB2Q7Z5Q1 589 aaKnown RBP1.13□□□□□ -2.23
CCDC39-203ENST00000473854 ANKRD37Q7Z713 158 aa1.13□□□□□ -2.23
CCDC39-203ENST00000473854 MARCH3Q86UD3 253 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms