RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 BAXQ07812 192 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 FOXF1Q12946 379 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 TMEM92Q6UXU6 159 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 LHFPL2Q6ZUX7 228 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 RABEPKQ7Z6M1 372 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 OR8U1Q8NH10 309 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 NKX3-1Q99801 234 aaPredicted RBP5.38□□□□□ -1.55
HERC4-209ENST00000473533 RTN4RQ9BZR6 473 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 VN1R1Q9GZP7 353 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 METTL7AQ9H8H3 244 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 OR2W5A6NFC9 320 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 LMO7DNF2Z398 122 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 STMND1H3BQB6 276 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 TP53I11O14683 189 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 SERPINA2P20848 420 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 CSNK1A1P48729 337 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 SSTP61278 116 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 VAMP2P63027 116 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 TLE4Q04727 773 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 MYBPHQ13203 477 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 HIST2H3PS2Q5TEC6 136 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 PTCRAQ6ISU1 281 aaPredicted RBP5.38□□□□□ -1.55
HERC4-209ENST00000473533 TMPPEQ6ZT21 453 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 OR10S1Q8NGN2 331 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 MAFIPQ8WZ33 124 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 SHDQ96IW2 340 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 PFDN5Q99471 154 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 FOXQ1Q9C009 403 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 NELFAQ9H3P2 528 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 KIAA1456Q9P272 454 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 CYP8B1Q9UNU6 501 aa5.38□□□□□ -1.55
HERC4-209ENST00000473533 SEC14L6B5MCN3 397 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 SDCBPO00560 298 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 TOX3O15405 576 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 RAD51DO75771 328 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 IGLV3-1P01715 115 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 HEXBP07686 556 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 PI3P19957 117 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 CD27P26842 260 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 CD38P28907 300 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 PIGPP57054 158 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 C10orf128Q5T292 105 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 OR2I1PQ8NGU4 316 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 RNF138Q8WVD3 245 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 RTN4IP1Q8WWV3 396 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 ROBO4Q8WZ75 1007 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ZNF524Q96C55 264 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 MRPL38Q96DV4 380 aaKnown RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 MARS2Q96GW9 593 aaKnown RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 SEMA5BQ9P283 1151 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 MIOXQ9UGB7 285 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 RNF150Q9ULK6 438 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 AQP7P3A6NL99 342 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 NME2P1O60361 137 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 PITX3O75364 302 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 DFFBO76075 338 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ZFAND5O76080 213 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 DIRAS3O95661 229 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 IFNA10P01566 189 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 QDPRP09417 244 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 TMEM225BP0DP42 221 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ACKR3P25106 362 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 GFERP55789 205 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ACY1Q03154 408 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 PNRC1Q12796 327 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 KIAA0141Q14154 515 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 TMEM187Q14656 261 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 OR8G1Q15617 311 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 HIKESHIQ53FT3 197 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 FAM209BQ5JX69 171 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 OTPQ5XKR4 325 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 SLC22A25Q6T423 547 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 WDR5BQ86VZ2 330 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 OR10G4Q8NGN3 311 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 Q96M66 194 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 GAS2L1Q99501 681 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 PLEKHF2Q9H8W4 249 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 CERS4Q9HA82 394 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 LOC101059948A0A1B0GTJ6 334 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 A0A1W2PPH5 198 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 LRP5LA4QPB2 252 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ZNF729A6NN14 1252 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 TRAF3IP2O43734 574 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 PRKNO60260 465 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 HSPB1P04792 205 aaKnown RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 HOXA5P20719 270 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 CDX1P47902 265 aaPredicted RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 MTCP1P56278 107 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 HIST3H3Q16695 136 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 PLPPR5Q32ZL2 321 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 OR2A2Q6IF42 318 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 ADAM5Q6NVV9 412 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 FOXL2NBQ6ZUU3 175 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 SLC16A13Q7RTY0 426 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 FAM219AQ8IW50 185 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 MRPL24Q96A35 216 aaKnown RBP5.37□□□□□ -1.55
HERC4-209ENST00000473533 DNAJA3Q96EY1 480 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 NIPSNAP3BQ9BS92 247 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 SMIM3Q9BZL3 60 aa5.37□□□□□ -1.55
HERC4-209ENST00000473533 GAR1Q9NY12 217 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 590.5 ms