RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 POMT1Q9Y6A1 747 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 A0A0U1RQV5 110 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 A0A1B0GVI7 797 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 A0A1W2PQ09 198 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 PQLC2LA1A4F0 135 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 TMEM210A6NLX4 147 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ANXA2P2A6NMY6 339 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 H3BUX3 64 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 GYG2O15488 501 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ANGPTL7O43827 346 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 MTRF1O75570 445 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 RPP14O95059 124 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 APOC1P02654 83 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 PIPP12273 146 aaPredicted RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 ANXA8P13928 327 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 COX7A1P24310 79 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 PRDX2P32119 198 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 MAP2K3P46734 347 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 UBE2E1P51965 193 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 CXCR4P61073 352 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 GNG3P63215 75 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ROM1Q03395 351 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 MZT1Q08AG7 82 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 RIPPLY1Q0D2K3 151 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 UBE2V2Q15819 145 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 SLC35D3Q5M8T2 416 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ZNF684Q5T5D7 378 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 TMEM42Q69YG0 159 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ZNF322Q6U7Q0 402 aaPredicted RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 BAIAP2L2Q6UXY1 529 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ZNF782Q6ZMW2 699 aaPredicted RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 MEPCEQ7L2J0 689 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 SLC35F2Q8IXU6 374 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 ZNF679Q8IYX0 411 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 LRTOMTQ8WZ04 291 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 C12orf43Q96C57 262 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 SDSLQ96GA7 329 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 RGCCQ9H4X1 137 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 C16orf95Q9H693 158 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 TCF7L1Q9HCS4 588 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 PAPOLBQ9NRJ5 636 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 MTCH1Q9NZJ7 389 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 OR14J1Q9UGF5 321 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 NUFIP1Q9UHK0 495 aaKnown RBP6.56□□□□□ -1.36
USP48-207ENST00000471752 OR52A1Q9UKL2 312 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 IKZF2Q9UKS7 526 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 GTF2A1LQ9UNN4 478 aa6.56□□□□□ -1.36
USP48-207ENST00000471752 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
USP48-207ENST00000471752 TMEM82A0PJX8 343 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 ZAR1LA6NP61 321 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 H0YAE9 185 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 MMP23AO75900 390 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 DNAJC8O75937 253 aaPredicted RBP6.55□□□□□ -1.36
USP48-207ENST00000471752 TSPAN9O75954 239 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 NRASP01111 189 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 PGA5P0DJD9 388 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 CFL1P23528 166 aaKnown RBP6.55□□□□□ -1.36
USP48-207ENST00000471752 DUSP1P28562 367 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 HAAOP46952 286 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 CAPZA1P52907 286 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 CAV3P56539 151 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 ERVK11-1P61568 191 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 SLX4IPQ5VYV7 408 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 C12orf73Q69YU5 71 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 KDM4DQ6B0I6 523 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 METAP1DQ6UB28 335 aaPredicted RBP6.55□□□□□ -1.36
USP48-207ENST00000471752 TCF23Q7RTU1 214 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 THAP5Q7Z6K1 395 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 COMMD2Q86X83 199 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 ELMOD2Q8IZ81 293 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 PRSS35Q8N3Z0 413 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 TPRX1Q8N7U7 411 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 OR5A2Q8NGI9 324 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 OR51G2Q8NGK0 314 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 OR2T27Q8NH04 317 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 TRMT10AQ8TBZ6 339 aaKnown RBP6.55□□□□□ -1.36
USP48-207ENST00000471752 TMEM163Q8TC26 289 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 MED30Q96HR3 178 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 HIST1H2AAQ96QV6 131 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 SSX3Q99909 188 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 NRIP2Q9BQI9 281 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 MROQ9BYG7 248 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 ZNF556Q9HAH1 456 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 V9GYS6 101 aa6.55□□□□□ -1.36
USP48-207ENST00000471752 FAM230AA0A1W2PPH8 454 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 A0A1W2PQL4 384 aaPredicted RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 ACOD1A6NK06 481 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 G3V4G9 280 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 J3QL48 77 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 M0R1W7 72 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 DHRS3O75911 302 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 FBP1P09467 338 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 EEF1B2P24534 225 aaKnown RBP6.54□□□□□ -1.36
USP48-207ENST00000471752 KIR3DL2P43630 455 aa6.54□□□□□ -1.36
USP48-207ENST00000471752 NPBWR2P48146 333 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms