RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SLC22A4Q9H015 551 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 UBTD1Q9HAC8 227 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 IL36GQ9NZH8 169 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 NDUFA13Q9P0J0 144 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF222Q9UK12 451 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 POU2F3Q9UKI9 436 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 LAMP3Q9UQV4 416 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 ITPR2Q14571 2701 aa8.31□□□□□ -1.08
SF3A1-207ENST00000471342 FAM230AA0A1W2PPH8 454 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 LRP5LA4QPB2 252 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 J3QT63 122 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 CTDSP2O14595 271 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 CD2P06729 351 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
SF3A1-207ENST00000471342 PRKACBP22694 351 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF93P35789 620 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-207ENST00000471342 GNALP38405 381 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 RBP2P50120 134 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 RIN1Q13671 783 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 C2orf76Q3KRA6 126 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 AGAP6Q5VW22 663 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 ELP2Q6IA86 826 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 Q6P435 159 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 LHFPL2Q6ZUX7 228 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 USP43Q70EL4 1123 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 FBXL14Q8N1E6 418 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 FAM89BQ8N5H3 189 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 ZSCAN4Q8NAM6 433 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-207ENST00000471342 POC1AQ8NBT0 407 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 OR51D1Q8NGF3 324 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 OR10K1Q8NGX5 313 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 TBC1D15Q8TC07 691 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 TECTBQ96PL2 329 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 TCF7L1Q9HCS4 588 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 CYSLTR2Q9NS75 346 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
SF3A1-207ENST00000471342 KCNK7Q9Y2U2 307 aa8.3□□□□□ -1.08
SF3A1-207ENST00000471342 A0A075B6Q4 140 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM272A0A1B0GTI8 110 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 A0A1B0GW55 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM210A6NLX4 147 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM178BH3BS89 294 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-207ENST00000471342 GRPP07492 148 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 INHBBP09529 407 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L2P0CJ85 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L3P0CJ86 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L4P0CJ87 422 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L5P0CJ88 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L6P0CJ89 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L7P0CJ90 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 BCL3P20749 454 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 SSTR2P30874 369 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 HAAOP46952 286 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MTCP1P56278 107 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TNFAIP6P98066 277 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-207ENST00000471342 P2RY14Q15391 338 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MOGAT2Q3SYC2 334 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 NHLRC3Q5JS37 347 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 HES5Q5TA89 166 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 HAGHLQ6PII5 290 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4L9Q6RFH8 374 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-207ENST00000471342 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 SLC25A26Q70HW3 274 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MOGAT3Q86VF5 341 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 NKAIN3Q8N8D7 197 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 SPERTQ8NA61 448 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 OR51T1Q8NGJ9 327 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 THRSPQ92748 146 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MICU1Q9BPX6 476 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TM2D1Q9BX74 207 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 LPAR5Q9H1C0 372 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 MS4A5Q9H3V2 200 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 ABCB9Q9NP78 766 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 UFSP2Q9NUQ7 469 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 RBFOX1Q9NWB1 397 aaKnown RBP8.29□□□□□ -1.08
SF3A1-207ENST00000471342 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 DUX4Q9UBX2 424 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 METRNQ9UJH8 293 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 GSTK1Q9Y2Q3 226 aa8.29□□□□□ -1.08
SF3A1-207ENST00000471342 IGKV1D-17A0A075B6S4 117 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 RAB27BO00194 218 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 FSTL3O95633 263 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 CALCBP10092 127 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 HTR2CP28335 458 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 MRPS11P82912 194 aaKnown RBP8.28□□□□□ -1.08
SF3A1-207ENST00000471342 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
SF3A1-207ENST00000471342 MOGQ16653 247 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 TEX36Q5VZQ5 186 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 GLIPR1L1Q6UWM5 242 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 BATF2Q8N1L9 274 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 CD177Q8N6Q3 437 aa8.28□□□□□ -1.08
SF3A1-207ENST00000471342 C19orf18Q8NEA5 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms