RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MEGF8Q7Z7M0 2845 aa15.73■□□□□ 0.11
COL7A1-207ENST00000467985 H0YAE9 185 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 DLGAP1O14490 977 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 SLC16A6O15403 523 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 RHBDL1O75783 438 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 MELTFP08582 738 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 OR2T7P0C7T2 308 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 CLVS2Q5SYC1 327 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 METAP1DQ6UB28 335 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-207ENST00000467985 C1orf122Q6ZSJ8 110 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF573Q86YE8 665 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 OR2T27Q8NH04 317 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 TBC1D15Q8TC07 691 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 H1FXQ92522 213 aaKnown RBP15.72■□□□□ 0.11
COL7A1-207ENST00000467985 RFKQ969G6 155 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 PPP1R14AQ96A00 147 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL7A1-207ENST00000467985 V9GYS6 101 aa15.72■□□□□ 0.11
COL7A1-207ENST00000467985 CRYBA1P05813 215 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 RPL15P61313 204 aaKnown RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 GUCA2AQ02747 115 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 DGUOKQ16854 277 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 SMIM21Q3B7S5 101 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 TMEM42Q69YG0 159 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 HAGHLQ6PII5 290 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 C8orf59Q8N0T1 100 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 YIPF7Q8N8F6 280 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF184Q99676 751 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 Q9H521 79 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 UNKLQ9H9P5 680 aaKnown RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 POLDIP2Q9Y2S7 368 aa15.71■□□□□ 0.11
COL7A1-207ENST00000467985 CAB39Q9Y376 341 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-207ENST00000467985 IGKV1D-17A0A075B6S4 117 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 A0A1B0GUS0 222 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 MAGEB4O15481 346 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-207ENST00000467985 MPZL2O60487 215 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 SULT1C4O75897 302 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 PSG2P11465 335 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 SELLP14151 372 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 NDUFB7P17568 137 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 EEF1B2P24534 225 aaKnown RBP15.7■□□□□ 0.1
COL7A1-207ENST00000467985 ATP6V1E1P36543 226 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 GABRA2P47869 451 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 ADARB1P78563 741 aaKnown RBP15.7■□□□□ 0.1
COL7A1-207ENST00000467985 IL18R1Q13478 541 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 Q6ZSR3 168 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 TRUB1Q8WWH5 349 aaKnown RBP15.7■□□□□ 0.1
COL7A1-207ENST00000467985 SDSLQ96GA7 329 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 FAM96BQ9Y3D0 163 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 MMP24Q9Y5R2 645 aa15.7■□□□□ 0.1
COL7A1-207ENST00000467985 TRRAPQ9Y4A5 3859 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 TRBV23-1A0A0A0MS06 115 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 A0A1B0GTI1 187 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 A0A1W2PQ09 198 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 A0A1W2PQL4 384 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-207ENST00000467985 FAM181BA6NEQ2 426 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 METTL15A6NJ78 407 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 J3QT63 122 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 M0R1W7 72 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 CLIC3O95833 236 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 HAAOP46952 286 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 BLMHQ13867 455 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 ZNF691Q5VV52 312 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 FIP1L1Q6UN15 594 aaKnown RBP15.69■□□□□ 0.1
COL7A1-207ENST00000467985 PLEKHG7Q6ZR37 379 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 LDLRAD3Q86YD5 345 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 POC1AQ8NBT0 407 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 CCDC54Q8NEL0 328 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 TBX5Q99593 518 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 CHIAQ9BZP6 476 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 SLITRK2Q9H156 845 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 METTL8Q9H825 291 aaKnown RBP15.69■□□□□ 0.1
COL7A1-207ENST00000467985 ZNF222Q9UK12 451 aa15.69■□□□□ 0.1
COL7A1-207ENST00000467985 A0A0U1RQK1 487 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 PQLC2LA1A4F0 135 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 SPRY1O43609 319 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-207ENST00000467985 NOS1APO75052 506 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-207ENST00000467985 RPP14O95059 124 aaKnown RBP15.68■□□□□ 0.1
COL7A1-207ENST00000467985 CCL1P22362 96 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 NCR3LG1Q68D85 454 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 ACP7Q6ZNF0 438 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 SSX6Q7RTT6 188 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 CATSPERDQ86XM0 798 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 PDZD9Q8IXQ8 264 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 Q8N7P7 452 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 OR10H4Q8NGA5 316 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 OR14K1Q8NGZ2 314 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 OR4F5Q8NH21 305 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 DYRK2Q92630 601 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 TFAP2CQ92754 450 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 DPAGT1Q9H3H5 408 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 PLEKHA1Q9HB21 404 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 BEX1Q9HBH7 125 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 SIRT7Q9NRC8 400 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 GPR173Q9NS66 373 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 TNFRSF19Q9NS68 423 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 RAB26Q9ULW5 256 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 SLC22A13Q9Y226 551 aa15.68■□□□□ 0.1
COL7A1-207ENST00000467985 SNTNA6NMZ2 147 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms