RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 MBP02144 154 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 CD99P14209 185 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 P2RY2P41231 377 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 GDI2P50395 445 aaKnown RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 MTPNP58546 118 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 PPP1CAP62136 330 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 RBX1P62877 108 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 C2orf54Q08AI8 447 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 APOBEC3HQ6NTF7 200 aaKnown RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 SETD3Q86TU7 594 aaPredicted RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 CYB561A3Q8NBI2 242 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 SLC26A10Q8NG04 563 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 OR52K1Q8NGK4 314 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 OR6K6Q8NGW6 343 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 OR51A7Q8NH64 312 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 OR1S1Q8NH92 325 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 ZFAND1Q8TCF1 268 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 CACNG8Q8WXS5 425 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 MRPL48Q96GC5 212 aaKnown RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 NAP1L5Q96NT1 182 aaPredicted RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 GPR82Q96P67 336 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 SPACA5Q96QH8 159 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 TSNAXQ99598 290 aaKnown RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 MAP1LC3CQ9BXW4 147 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 FRMD8P1Q9BZ68 369 aaPredicted RBP1.78□□□□□ -2.12
SMC4-205ENST00000465563 IL37Q9NZH6 218 aa1.78□□□□□ -2.12
SMC4-205ENST00000465563 LOC102724200A0A096LPH7 203 aaPredicted RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 GSTTP1A0A1W2PQM5 241 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 ANKRD20A5PA0PJZ0 165 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 ISPDA4D126 451 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 GOLGA8JA6NMD2 632 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 A8MWL6 223 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 ALOX12BO75342 701 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 SCO1O75880 301 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 MAS1P04201 325 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 OR5AL1P0C617 328 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 GOLGA8HP0CJ92 632 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 TGM4P49221 684 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 RPL31P62899 125 aaKnown RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 MEF2CQ06413 473 aaPredicted RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 ATP6V1FQ16864 119 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 HNRNPA1L2Q32P51 320 aaKnown RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 TMEM136Q6ZRR5 245 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 NT5DC3Q86UY8 548 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 BBS7Q8IWZ6 715 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 ARHGAP18Q8N392 663 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 TNFRSF14Q92956 283 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 TMEM159Q96B96 161 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 CENPNQ96H22 339 aaPredicted RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 LHX5Q9H2C1 402 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 GAL3ST2Q9H3Q3 398 aa1.77□□□□□ -2.13
SMC4-205ENST00000465563 YLPM1P49750 1951 aaKnown RBP1.77□□□□□ -2.13
SMC4-205ENST00000465563 AQRO60306 1485 aaKnown RBP eCLIP1.76□□□□□ -2.131e-12■■■■□ 21.5
SMC4-205ENST00000465563 PRAMEF26H0Y7S4 382 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 H0YC42 278 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 STAG3L2P0CL84 134 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 ATP5J2P56134 94 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 TAS2R60P59551 318 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 GRB2P62993 217 aaKnown RBP1.76□□□□□ -2.13
SMC4-205ENST00000465563 BTN1A1Q13410 526 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 TOMM34Q15785 309 aaPredicted RBP1.76□□□□□ -2.13
SMC4-205ENST00000465563 FAM27D1Q5T7N8 215 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 HHATQ5VTY9 493 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 SLC25A25Q6KCM7 469 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 CASP12Q6UXS9 341 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 LINC00469Q8N7U9 141 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 OR13C9Q8NGT0 318 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 MITD1Q8WV92 249 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 Q96MT0 163 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 PDCD1LG2Q9BQ51 273 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 DDIT4Q9NX09 232 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 RWDD2AQ9UIY3 292 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 SAMHD1Q9Y3Z3 626 aaKnown RBP1.76□□□□□ -2.13
SMC4-205ENST00000465563 PLXNB1O43157 2135 aa1.76□□□□□ -2.13
SMC4-205ENST00000465563 ELP1O95163 1332 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 CLDN34H7C241 214 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 M0R1B8 84 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 MFNGO00587 321 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 GATCO43716 136 aaKnown RBP1.75□□□□□ -2.13
SMC4-205ENST00000465563 NDUFS5O43920 106 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 VAPBO95292 243 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 IGHV1-46P01743 117 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 HOXB8P17481 243 aaPredicted RBP1.75□□□□□ -2.13
SMC4-205ENST00000465563 TEAD1P28347 426 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 IL15RAQ13261 267 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 DYNC1I2Q13409 638 aaKnown RBP1.75□□□□□ -2.13
SMC4-205ENST00000465563 TAL2Q16559 108 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 NDUFAF6Q330K2 333 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 CDNFQ49AH0 187 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 TTC32Q5I0X7 151 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 TMEM69Q5SWH9 247 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 DUPD1Q68J44 220 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 C1orf64Q8NEQ6 169 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 OR1P1Q8NH06 330 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 ZNF420Q8TAQ5 688 aaPredicted RBP1.75□□□□□ -2.13
SMC4-205ENST00000465563 FAM57AQ8TBR7 257 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 HGDQ93099 445 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 FAM131CQ96AQ9 280 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 STMN3Q9NZ72 180 aa1.75□□□□□ -2.13
SMC4-205ENST00000465563 SLC7A11Q9UPY5 501 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms