RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RBMX2Q9Y388 322 aaKnown RBP11.87□□□□□ -0.51
HDAC6-215ENST00000465457 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 CACNG2Q9Y698 323 aa11.87□□□□□ -0.51
HDAC6-215ENST00000465457 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 ORC5O43913 435 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 DBHP09172 617 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 SPNP16150 400 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 PRKACBP22694 351 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 SLC6A1P30531 599 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 FAUP35544 74 aaKnown RBP11.86□□□□□ -0.51
HDAC6-215ENST00000465457 GDNFP39905 211 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 DGCR2P98153 550 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 MADCAM1Q13477 382 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 TMEM249Q2WGJ8 235 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 ALKBH2Q6NS38 261 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 TFAP2EQ6VUC0 442 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 COLCA1Q6ZS62 124 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 KRT74Q7RTS7 529 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 C1orf162Q8NEQ5 155 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-215ENST00000465457 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 FAM46BQ96A09 425 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 SPSB4Q96A44 273 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 BOD1Q96IK1 185 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 CNTD2Q9H8S5 307 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
HDAC6-215ENST00000465457 CIB4A0PJX0 185 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 A6NIN4 97 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 CSF1P09603 554 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 CD3GP09693 182 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 TRAPPC2P0DI81 140 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 TRAPPC2BP0DI82 140 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 ACTBP60709 375 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 ACTG1P63261 375 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 MALLQ13021 153 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 SFRP5Q5T4F7 317 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 AWAT2Q6E213 333 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 Q6ZT83 130 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 CADM3Q8N126 398 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 OR4D6Q8NGJ1 314 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 SLC7A6Q92536 515 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 BCL2L2Q92843 193 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 APOBEC3DQ96AK3 386 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 GPER1Q99527 375 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 CST11Q9H112 138 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 DPAGT1Q9H3H5 408 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 C12orf49Q9H741 205 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 MOV10Q9HCE1 1003 aaKnown RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF224Q9NZL3 707 aa11.85□□□□□ -0.51
HDAC6-215ENST00000465457 ZNF107Q9UII5 783 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 MRPS28Q9Y2Q9 187 aaKnown RBP11.85□□□□□ -0.51
HDAC6-215ENST00000465457 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC6-215ENST00000465457 CHRM2P08172 466 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 CD79AP11912 226 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 STOMP27105 288 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 PRSS3P35030 304 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 RAB1AP62820 205 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 KLF9Q13886 244 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-215ENST00000465457 GPR176Q14439 515 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 OR8B8Q15620 311 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 GSG1Q2KHT4 349 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 AGAP6Q5VW22 663 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 NAA40Q86UY6 237 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 IZUMO1Q8IYV9 350 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 FTMTQ8N4E7 242 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 FGFBP3Q8TAT2 258 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 ACTR6Q9GZN1 396 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 PRSS50Q9UI38 385 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 PROCRQ9UNN8 238 aa11.84□□□□□ -0.51
HDAC6-215ENST00000465457 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 A0A096LPE4 126 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 ZNF816-ZNF321PA0A0X1KG74 233 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 A0A1W2PPZ6 126 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 ANKRD20A5PA0PJZ0 165 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 TMEM14DPA8MWL7 114 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 H7C417 338 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 LANCL1O43813 399 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 SSX4O60224 188 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 RBBP9O75884 186 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 HLA-HP01893 362 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 LPLP06858 475 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 PATE4P0C8F1 98 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 FAHP16930 419 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 APLNRP35414 380 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 EFNB2P52799 333 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 RAG2P55895 527 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 BTG1P62324 171 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 QRFPP83859 136 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 HGFACQ04756 655 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 SNTB2Q13425 540 aaKnown RBP11.83□□□□□ -0.52
HDAC6-215ENST00000465457 KISS1Q15726 138 aa11.83□□□□□ -0.52
HDAC6-215ENST00000465457 TBRG1Q3YBR2 411 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms