RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 F5H5P2 479 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
COL5A1-205ENST00000464187 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
COL5A1-205ENST00000464187 CXCL2P19875 107 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 HRH1P35367 487 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 ALDH3B1P43353 468 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 TMEM50BP56557 158 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 GNG2P59768 71 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 ZMYND11Q15326 602 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 MPPED2Q15777 294 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 KRTAP27-1Q3LI81 207 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 DRAM2Q6UX65 266 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 PNLDC1Q8NA58 520 aaKnown RBP12.57□□□□□ -0.4
COL5A1-205ENST00000464187 CCDC54Q8NEL0 328 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 OR1F12Q8NHA8 337 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 AKR7LQ8NHP1 331 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 SGK3Q96BR1 496 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 PLSCR4Q9NRQ2 329 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 TINAGQ9UJW2 476 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF835Q9Y2P0 537 aa12.57□□□□□ -0.4
COL5A1-205ENST00000464187 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 OR6C6A6NF89 314 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 MFNGO00587 321 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 MTRF1O75570 445 aaKnown RBP12.56□□□□□ -0.4
COL5A1-205ENST00000464187 RAD51DO75771 328 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 CRHP06850 196 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 NAT2P11245 290 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 PTGFRP43088 359 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 RPS27AP62979 156 aaKnown RBP12.56□□□□□ -0.4
COL5A1-205ENST00000464187 GRK1Q15835 563 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 EIF2S3LQ2VIR3 472 aaKnown RBP12.56□□□□□ -0.4
COL5A1-205ENST00000464187 OR56B1Q8NGI3 324 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 OR52H1Q8NGJ2 320 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 OR1K1Q8NGR3 316 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 C10orf35Q96D05 121 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 ELMOD3Q96FG2 381 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 B3GNT2Q9NY97 397 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 PLEKHA6Q9Y2H5 1048 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 ACACBO00763 2458 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 ATRXP46100 2492 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 RP1L1Q8IWN7 2480 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-205ENST00000464187 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF503-AS2A6NEH8 195 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 SLC22A5O76082 557 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 CGAP01215 116 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 HLA-HP01893 362 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 EDN3P14138 238 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 TBPP20226 339 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 ACKR3P25106 362 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 RBPJQ06330 500 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 DHRS2Q13268 280 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 HIKESHIQ53FT3 197 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 FAM89BQ8N5H3 189 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 C12orf45Q8N5I9 185 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 PIGTQ969N2 578 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 URM1Q9BTM9 101 aaKnown RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 CST11Q9H112 138 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 CLEC4MQ9H2X3 399 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 GHRLQ9UBU3 117 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 ITPR1Q14643 2758 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 LOC100509620A0A075B734 347 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 FOXI3A8MTJ6 420 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 LYZL6O75951 148 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 RGS11O94810 467 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 PMP2P02689 132 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 GLI4P10075 376 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 NAT1P18440 290 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 CEACAM8P31997 349 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 HTR5AP47898 357 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 EXOSC2Q13868 293 aaKnown RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 OPCMLQ14982 345 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 FAM189A2Q15884 450 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 LY6G6FQ5SQ64 297 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 ZDHHC22Q8N966 263 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 SEMA6DQ8NFY4 1073 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 BCL2L2Q92843 193 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 REEP6Q96HR9 211 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-205ENST00000464187 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
COL5A1-205ENST00000464187 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 M0R233 179 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
COL5A1-205ENST00000464187 CD79AP11912 226 aa12.54□□□□□ -0.4
COL5A1-205ENST00000464187 MGMTP16455 207 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms