RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PRR7Q8TB68 274 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 LRRC46Q96FV0 321 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 WFIKKN1Q96NZ8 548 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 SLC22A4Q9H015 551 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 ZMAT3Q9HA38 289 aaKnown RBP16.24■□□□□ 0.19
CCDC78-206ENST00000463539 NGBQ9NPG2 151 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 RBMX2Q9Y388 322 aaKnown RBP16.24■□□□□ 0.19
CCDC78-206ENST00000463539 ORC5O43913 435 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 CYB5AP00167 134 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 SRP9P49458 86 aaKnown RBP16.24■□□□□ 0.19
CCDC78-206ENST00000463539 OR8G1Q15617 311 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 DNM1P46Q6ZS02 220 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-206ENST00000463539 GALNT11Q8NCW6 608 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 TM2D1Q9BX74 207 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 PCDHB16Q9NRJ7 776 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 TMEM100Q9NV29 134 aa16.24■□□□□ 0.19
CCDC78-206ENST00000463539 TMEM235A6NFC5 223 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 LYRM1O43325 122 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 MZT2BQ6NZ67 158 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 HAGHLQ6PII5 290 aaPredicted RBP16.23■□□□□ 0.19
CCDC78-206ENST00000463539 VHLLQ6RSH7 139 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 Q6ZTK2 550 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 NRARPQ7Z6K4 114 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 SAXO1Q8IYX7 474 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 FAM89BQ8N5H3 189 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 AQP3Q92482 292 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 RAB3CQ96E17 227 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 COX4I2Q96KJ9 171 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 KLK11Q9UBX7 282 aa16.23■□□□□ 0.19
CCDC78-206ENST00000463539 CFAP46Q8IYW2 2715 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 WIPF3A6NGB9 483 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 ABCD4O14678 606 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 SOCS1O15524 211 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 SSX4O60224 188 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 SFTPBP07988 381 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 ZNF250P15622 560 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 RFX2P48378 723 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 GUCA2AQ02747 115 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 BSPH1Q075Z2 132 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 ZNF260Q3ZCT1 412 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 CDNFQ49AH0 187 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 TMEM171Q8WVE6 324 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 MRPS24Q96EL2 167 aaKnown RBP16.22■□□□□ 0.19
CCDC78-206ENST00000463539 Q96M66 194 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 SCPEP1Q9HB40 452 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 KCNJ16Q9NPI9 418 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 DUSP13Q9UII6 198 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-206ENST00000463539 DPRXA6NFQ7 191 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 LPLP06858 475 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 GNB3P16520 340 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 GNLYP22749 145 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 UQCRFS1P47985 274 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 AP3S2P59780 193 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 TLE1Q04724 770 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 MSMPQ1L6U9 139 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 TMEM200AQ86VY9 491 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 MKXQ8IYA7 352 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 OSR2Q8N2R0 312 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 NUP37Q8NFH4 326 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 OR10AD1Q8NGE0 317 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 SLAMF9Q96A28 289 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 OR51I2Q9H344 312 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 NKIRAS2Q9NYR9 191 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 CACNG2Q9Y698 323 aa16.22■□□□□ 0.19
CCDC78-206ENST00000463539 MYO7BQ6PIF6 2116 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 H7C417 338 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 SULT1C2O00338 296 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 RBBP9O75884 186 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 ECDO95905 644 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-206ENST00000463539 GSTT2BP0CG30 244 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 SPNP16150 400 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 HIST1H1DP16402 221 aaKnown RBP16.21■□□□□ 0.19
CCDC78-206ENST00000463539 KLF3P57682 345 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-206ENST00000463539 KLF9Q13886 244 aaPredicted RBP16.21■□□□□ 0.19
CCDC78-206ENST00000463539 CDSNQ15517 529 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 SLC22A25Q6T423 547 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 FBXL14Q8N1E6 418 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 ENKURQ8TC29 256 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 GPX8Q8TED1 209 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 SEH1LQ96EE3 360 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 PKIBQ9C010 78 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 RBFOX1Q9NWB1 397 aaKnown RBP16.21■□□□□ 0.19
CCDC78-206ENST00000463539 MTFP1Q9UDX5 166 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 RELNP78509 3460 aa16.21■□□□□ 0.19
CCDC78-206ENST00000463539 LRP5LA4QPB2 252 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 CENPXA8MT69 81 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 J3QT63 122 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 MLNRO43193 412 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 IGHV3-13P01766 116 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 GABRR1P24046 479 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 BLVRBP30043 206 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-206ENST00000463539 IGFBP7Q16270 282 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 C4orf17Q53FE4 359 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 FAM76BQ5HYJ3 339 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 PLAC9Q5JTB6 97 aa16.2■□□□□ 0.18
CCDC78-206ENST00000463539 CCBE1Q6UXH8 406 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-206ENST00000463539 LRP11Q86VZ4 500 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms