RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 LHX9Q9NQ69 397 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 CA10Q9NS85 328 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 RAB23Q9ULC3 237 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 ATP6V1DQ9Y5K8 247 aa2.6□□□□□ -1.99
USH2A-203ENST00000463147 PUS1Q9Y606 427 aaKnown RBP eCLIP2.6□□□□□ -1.99
USH2A-203ENST00000463147 NCAPD3P42695 1498 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 NACADO15069 1562 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 FABP12A6NFH5 140 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 GOLGA8JA6NMD2 632 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 SULT1C2O00338 296 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 AQP9O43315 295 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 IGLV3-25P01717 112 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 APCSP02743 223 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 MT-ND4P03905 459 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 GOLGA8HP0CJ92 632 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 M6PRP20645 277 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 MSNP26038 577 aaKnown RBP2.59□□□□□ -1.99
USH2A-203ENST00000463147 TUFMP49411 452 aaKnown RBP2.59□□□□□ -1.99
USH2A-203ENST00000463147 TPM4P67936 248 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 CD164Q04900 197 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 KDSRQ06136 332 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 RAB31Q13636 194 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 PIGHQ14442 188 aaPredicted RBP2.59□□□□□ -1.99
USH2A-203ENST00000463147 TRAM1Q15629 374 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 TOMM34Q15785 309 aaPredicted RBP2.59□□□□□ -1.99
USH2A-203ENST00000463147 CDNFQ49AH0 187 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 TSPO2Q5TGU0 170 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 PRNTQ86SH4 94 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 OR8G5Q8NG78 346 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 OR4M1Q8NGD0 313 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 OR4K2Q8NGD2 314 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 OR1J4Q8NGS1 313 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 UBA3Q8TBC4 463 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 DOK4Q8TEW6 326 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 ALS2CR12Q96Q35 445 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 SPACA5Q96QH8 159 aa2.59□□□□□ -1.99
USH2A-203ENST00000463147 IMP3Q9NV31 184 aaKnown RBP2.59□□□□□ -1.99
USH2A-203ENST00000463147 ABCB11O95342 1321 aa2.59□□□□□ -2
USH2A-203ENST00000463147 A0A1W2PP18 115 aa2.58□□□□□ -2
USH2A-203ENST00000463147 ISPDA4D126 451 aa2.58□□□□□ -2
USH2A-203ENST00000463147 OR5H1A6NKK0 313 aa2.58□□□□□ -2
USH2A-203ENST00000463147 BPY2O14599 106 aa2.58□□□□□ -2
USH2A-203ENST00000463147 MYL12BO14950 172 aa2.58□□□□□ -2
USH2A-203ENST00000463147 FOXH1O75593 365 aa2.58□□□□□ -2
USH2A-203ENST00000463147 TPM3P06753 285 aa2.58□□□□□ -2
USH2A-203ENST00000463147 ZNF806P0C7X5 589 aa2.58□□□□□ -2
USH2A-203ENST00000463147 CD40LGP29965 261 aa2.58□□□□□ -2
USH2A-203ENST00000463147 ZNF133P52736 654 aaPredicted RBP2.58□□□□□ -2
USH2A-203ENST00000463147 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
USH2A-203ENST00000463147 RAB38P57729 211 aa2.58□□□□□ -2
USH2A-203ENST00000463147 DSTNP60981 165 aa2.58□□□□□ -2
USH2A-203ENST00000463147 IFITM3Q01628 133 aa2.58□□□□□ -2
USH2A-203ENST00000463147 NAB1Q13506 487 aa2.58□□□□□ -2
USH2A-203ENST00000463147 SLC25A35Q3KQZ1 300 aa2.58□□□□□ -2
USH2A-203ENST00000463147 C2orf83Q53S99 150 aa2.58□□□□□ -2
USH2A-203ENST00000463147 FAM78AQ5JUQ0 283 aa2.58□□□□□ -2
USH2A-203ENST00000463147 TIMM23BQ5SRD1 257 aa2.58□□□□□ -2
USH2A-203ENST00000463147 MDP1Q86V88 176 aa2.58□□□□□ -2
USH2A-203ENST00000463147 OR2M7Q8NG81 312 aa2.58□□□□□ -2
USH2A-203ENST00000463147 ACTL9Q8TC94 416 aa2.58□□□□□ -2
USH2A-203ENST00000463147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.58□□□□□ -2
USH2A-203ENST00000463147 TNFRSF14Q92956 283 aa2.58□□□□□ -2
USH2A-203ENST00000463147 EXOSC8Q96B26 276 aaKnown RBP2.58□□□□□ -2
USH2A-203ENST00000463147 ZMYND19Q96E35 227 aaPredicted RBP2.58□□□□□ -2
USH2A-203ENST00000463147 WDR34Q96EX3 536 aa2.58□□□□□ -2
USH2A-203ENST00000463147 METTL26Q96S19 204 aa2.58□□□□□ -2
USH2A-203ENST00000463147 SRRQ9GZT4 340 aa2.58□□□□□ -2
USH2A-203ENST00000463147 NXF2Q9GZY0 626 aaKnown RBP2.58□□□□□ -2
USH2A-203ENST00000463147 WDR54Q9H977 334 aa2.58□□□□□ -2
USH2A-203ENST00000463147 HMG20AQ9NP66 347 aa2.58□□□□□ -2
USH2A-203ENST00000463147 TAS2R13Q9NYV9 303 aa2.58□□□□□ -2
USH2A-203ENST00000463147 UBAP1Q9NZ09 502 aa2.58□□□□□ -2
USH2A-203ENST00000463147 FBXL3Q9UKT7 428 aa2.58□□□□□ -2
USH2A-203ENST00000463147 TBX21Q9UL17 535 aa2.58□□□□□ -2
USH2A-203ENST00000463147 IGSF9BQ9UPX0 1349 aa2.58□□□□□ -2
USH2A-203ENST00000463147 DHX57Q6P158 1386 aaKnown RBP2.58□□□□□ -2
USH2A-203ENST00000463147 KIAA0232Q92628 1395 aa2.58□□□□□ -2
USH2A-203ENST00000463147 CEP162Q5TB80 1403 aa2.58□□□□□ -2
USH2A-203ENST00000463147 MIA3Q5JRA6 1907 aa2.58□□□□□ -2
USH2A-203ENST00000463147 LOXHD1Q8IVV2 1947 aa2.58□□□□□ -2
USH2A-203ENST00000463147 NUP153P49790 1475 aaKnown RBP2.58□□□□□ -2
USH2A-203ENST00000463147 NACAE9PAV3 2078 aa2.57□□□□□ -2
USH2A-203ENST00000463147 AHDC1Q5TGY3 1603 aaPredicted RBP2.57□□□□□ -2
USH2A-203ENST00000463147 UQCRHLA0A096LP55 91 aa2.57□□□□□ -2
USH2A-203ENST00000463147 A0A1B0GXF2 115 aa2.57□□□□□ -2
USH2A-203ENST00000463147 KLRC4-KLRK1H3BQV0 150 aa2.57□□□□□ -2
USH2A-203ENST00000463147 ITGB1BP1O14713 200 aa2.57□□□□□ -2
USH2A-203ENST00000463147 MPZL1O95297 269 aa2.57□□□□□ -2
USH2A-203ENST00000463147 UQCRHP07919 91 aa2.57□□□□□ -2
USH2A-203ENST00000463147 PPIDQ08752 370 aaKnown RBP2.57□□□□□ -2
USH2A-203ENST00000463147 FLOT2Q14254 428 aa2.57□□□□□ -2
USH2A-203ENST00000463147 CEACAM21Q3KPI0 293 aa2.57□□□□□ -2
USH2A-203ENST00000463147 FBXL19-AS1Q494R0 122 aa2.57□□□□□ -2
USH2A-203ENST00000463147 ZNF658BQ4V348 819 aaPredicted RBP2.57□□□□□ -2
USH2A-203ENST00000463147 ZNF684Q5T5D7 378 aa2.57□□□□□ -2
USH2A-203ENST00000463147 MFSD14CQ5VZR4 134 aa2.57□□□□□ -2
USH2A-203ENST00000463147 Q5W150 140 aa2.57□□□□□ -2
USH2A-203ENST00000463147 HBMQ6B0K9 141 aa2.57□□□□□ -2
USH2A-203ENST00000463147 Q6ZSR6 202 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms