RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 OR8B8Q15620 311 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM42Q69YG0 159 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 FAM180AQ6UWF9 173 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 TRAPPC6BQ86SZ2 158 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM229BQ8NBD8 167 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 NUDCD2Q8WVJ2 157 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
HDAC6-213ENST00000462730 S100A13Q99584 98 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-213ENST00000462730 PIPOXQ9P0Z9 390 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
HDAC6-213ENST00000462730 PLSCR5A0PG75 271 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 AHRRA9YTQ3 701 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 SOCS1O15524 211 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 NDUFB6O95139 128 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.4
HDAC6-213ENST00000462730 SERPINA2P20848 420 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 ID4P47928 161 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF584Q8IVC4 421 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 RBPMSQ93062 196 aaKnown RBP12.52□□□□□ -0.4
HDAC6-213ENST00000462730 WNT2BQ93097 391 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 POM121L2Q96KW2 1035 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 URM1Q9BTM9 101 aaKnown RBP12.52□□□□□ -0.4
HDAC6-213ENST00000462730 DOCK7Q96N67 2140 aa12.52□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF816-ZNF321PA0A0X1KG74 233 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 KRBOX1C9JBD0 128 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 CREBL2O60519 120 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-213ENST00000462730 CYB5AP00167 134 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 MELTFP08582 738 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 CXCL2P19875 107 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 RPS27AP62979 156 aaKnown RBP12.52□□□□□ -0.41
HDAC6-213ENST00000462730 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF626Q68DY1 528 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 MOB3CQ70IA8 216 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 MDP1Q86V88 176 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 Q8NA96 180 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 OR51T1Q8NGJ9 327 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-213ENST00000462730 RAB3CQ96E17 227 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 CPNE2Q96FN4 548 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-213ENST00000462730 COQ3Q9NZJ6 369 aa12.52□□□□□ -0.41
HDAC6-213ENST00000462730 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 M0QYG6 137 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 SVILO95425 2214 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 RAB3DO95716 219 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 TMEM225BP0DP42 221 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 MGMTP16455 207 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 ANXA7P20073 488 aaKnown RBP12.51□□□□□ -0.41
HDAC6-213ENST00000462730 APLNRP35414 380 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 MECP2P51608 486 aaKnown RBP12.51□□□□□ -0.41
HDAC6-213ENST00000462730 RAP2BP61225 183 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 FAM189A2Q15884 450 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 PLCXD3Q63HM9 321 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 OR51S1Q8NGJ8 323 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 PIGCQ92535 297 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 BORCS8Q96FH0 119 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 WBP1Q96G27 269 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 RDH8Q9NYR8 311 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
HDAC6-213ENST00000462730 SNRPGP15A8MWD9 76 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF736B4DX44 427 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 L7N2F9 121 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OR2A4O95047 310 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 IGHV1-2P23083 117 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 MALLQ13021 153 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 RBMS2Q15434 407 aaKnown RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 VWA1Q6PCB0 445 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 C3P1Q6ZMU1 363 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 MRPL21Q7Z2W9 205 aaKnown RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OR56B2PQ8NGI1 322 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 OR2A7Q96R45 310 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 GINS4Q9BRT9 223 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 TINAGL1Q9GZM7 467 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 GPN1Q9HCN4 374 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 IFT46Q9NQC8 304 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 A0A1B0GW55 424 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 hCG_1807616A0A1W2PRN6 198 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 SPRY1O43609 319 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-213ENST00000462730 SSX5O60225 188 aa12.5□□□□□ -0.41
HDAC6-213ENST00000462730 RAD51DO75771 328 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms