RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 LOC107986453A0A1B0GWG9 222 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 E9PI62 339 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CDIPTO14735 213 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CLPXO76031 633 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 ACAA1P09110 424 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 OMGP23515 440 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 DCKP27707 260 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 BPIFB3P59826 476 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 RELBQ01201 579 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 MRPL28Q13084 256 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 PDCD1Q15116 288 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CEP78Q5JTW2 689 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 ATPAF1Q5TC12 328 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 STUMQ69YW2 141 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CRIP3Q6Q6R5 217 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 FAM220AQ7Z4H9 259 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 KIR3DL3Q8N743 410 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 RPL3LQ92901 407 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 OR5V1Q9UGF6 321 aa11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 DIMT1Q9UNQ2 313 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-206ENST00000460767 TRAV38-1A0A0B4J264 116 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 SYT7O43581 403 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 NDUFA2O43678 99 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 NRASP01111 189 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 IRF2P14316 349 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 CD80P33681 288 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 ETV1P50549 477 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 GPM6AP51674 278 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 AQP4P55087 323 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 ALKBH1Q13686 389 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 UBE2V2Q15819 145 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 KPRPQ5T749 579 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 RDH10Q8IZV5 341 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 C19orf18Q8NEA5 215 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 OR10AC1Q8NH08 325 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 LRRC29Q8WV35 223 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 AQP3Q92482 292 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 GGHQ92820 318 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 RNF170Q96K19 258 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 SMURF1Q9HCE7 757 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 NOX4Q9NPH5 578 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 TRIM36Q9NQ86 728 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 ZNF222Q9UK12 451 aa11.28□□□□□ -0.6
SCAMP4-206ENST00000460767 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 IGKV1-9A0A0C4DH69 117 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 J3QLW9 94 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 RHBDL1O75783 438 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ZFPL1O95159 310 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 CRYBA1P05813 215 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 RPS2P15880 293 aaKnown RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ZNF19P17023 458 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 DOC2BQ14184 412 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 KCNJ8Q15842 424 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 TAF9Q16594 264 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ESCO2Q56NI9 601 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 DMRTC1Q5HYR2 192 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 SFRP4Q6FHJ7 346 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 XAF1Q6GPH4 301 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 OR51A4Q8NGJ6 313 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 ANGPTL6Q8NI99 470 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 HAVCR2Q8TDQ0 301 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 RGP1Q92546 391 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 SEH1LQ96EE3 360 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 MYCBPQ99417 103 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 SSBP3Q9BWW4 388 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 CNOT2Q9NZN8 540 aaKnown RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 PSORS1C1Q9UIG5 152 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 CAB39Q9Y376 341 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 POMT1Q9Y6A1 747 aa11.27□□□□□ -0.61
SCAMP4-206ENST00000460767 A0A1B0GVI7 797 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 A6NIN4 97 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 A6NLC8 198 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 C22orf46C9J442 243 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 C3orf80F5H4A9 247 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 LALBAP00709 142 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 MT-ND2P03891 347 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 HTR1AP08908 422 aa11.26□□□□□ -0.61
SCAMP4-206ENST00000460767 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms