RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ATP6AP1Q15904 470 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 DMRTC1Q5HYR2 192 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 CLVS2Q5SYC1 327 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 C12orf73Q69YU5 71 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF573Q86YE8 665 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 GID4Q8IVV7 300 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 FAM185AQ8N0U4 392 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 PNKDQ8N490 385 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 CADM1Q9BY67 442 aaKnown RBP18.62■□□□□ 0.57
PTPN4-207ENST00000460162 GABARAPL1Q9H0R8 117 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 MMP27Q9H306 513 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 CLN6Q9NWW5 311 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 H2AFY2Q9P0M6 372 aaPredicted RBP18.62■□□□□ 0.57
PTPN4-207ENST00000460162 ENOPH1Q9UHY7 261 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 POLDIP2Q9Y2S7 368 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 V9GYS6 101 aa18.62■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF670-ZNF695F2Z2N8 137 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 H0YAE9 185 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 DLGAP1O14490 977 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 TSPAN9O75954 239 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 PGA5P0DJD9 388 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 TGFBR2P37173 567 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 HAAOP46952 286 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 CAPZA1P52907 286 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 KRTAP10-3P60369 221 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 EFNB1P98172 346 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 EGR3Q06889 387 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 MIDNQ504T8 468 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 BCDIN3DQ7Z5W3 292 aaKnown RBP18.61■□□□□ 0.57
PTPN4-207ENST00000460162 ELMOD2Q8IZ81 293 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF561Q8N587 486 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 TCEANCQ8N8B7 351 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 BEND2Q8NDZ0 799 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 PPP1R14AQ96A00 147 aa18.61■□□□□ 0.57
PTPN4-207ENST00000460162 SF3B6Q9Y3B4 125 aaKnown RBP18.61■□□□□ 0.57
PTPN4-207ENST00000460162 A0A1W2PPH5 198 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 G3V2T6 193 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 SLC1A7O00341 560 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 MITFO75030 526 aaPredicted RBP18.6■□□□□ 0.57
PTPN4-207ENST00000460162 NOS1APO75052 506 aaPredicted RBP18.6■□□□□ 0.57
PTPN4-207ENST00000460162 KDM4DQ6B0I6 523 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 Q6ZSR3 168 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 APOL4Q9BPW4 351 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 OR52A1Q9UKL2 312 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPN4-207ENST00000460162 SNX5Q9Y5X3 404 aa18.6■□□□□ 0.57
PTPN4-207ENST00000460162 PQLC2LA1A4F0 135 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 RFPL4AA6NLU0 287 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 RFPL4AL1F8VTS6 287 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 SYNGR1O43759 233 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 MPZP25189 248 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 EPHA2P29317 976 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 DEFA6Q01524 100 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 HCP5Q6MZN7 132 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 ZDHHC13Q8IUH4 622 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 CD177Q8N6Q3 437 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 OR14K1Q8NGZ2 314 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 ZNF488Q96MN9 340 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 NRIP2Q9BQI9 281 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 GPR173Q9NS66 373 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 C19orf12Q9NSK7 152 aa18.59■□□□□ 0.57
PTPN4-207ENST00000460162 MRM2Q9UI43 246 aaKnown RBP18.59■□□□□ 0.57
PTPN4-207ENST00000460162 A0A1B0GTI1 187 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 ANGPTL7O43827 346 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 CCL1P22362 96 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 ASPHD2Q6ICH7 369 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 PLEKHG7Q6ZR37 379 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 OR51G2Q8NGK0 314 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 RBM4BQ9BQ04 359 aaKnown RBP18.58■□□□□ 0.56
PTPN4-207ENST00000460162 HES4Q9HCC6 221 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 TCF7L1Q9HCS4 588 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 NOTCH1P46531 2555 aa18.58■□□□□ 0.56
PTPN4-207ENST00000460162 ANKRD61A6NGH8 418 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 MAGEB4O15481 346 aaPredicted RBP18.57■□□□□ 0.56
PTPN4-207ENST00000460162 NXPH2O95156 264 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 KRT8P05787 483 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 FCGR1AP12314 374 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 FASP25445 335 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 PRDX2P32119 198 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 RPL31P62899 125 aaKnown RBP18.57■□□□□ 0.56
PTPN4-207ENST00000460162 BNIP1Q12981 228 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 PDLIM3Q53GG5 364 aaPredicted RBP18.57■□□□□ 0.56
PTPN4-207ENST00000460162 IL4I1Q96RQ9 567 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 FAM234AQ9H0X4 552 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 PLEKHA1Q9HB21 404 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 FAM53CQ9NYF3 392 aa18.57■□□□□ 0.56
PTPN4-207ENST00000460162 WARS2Q9UGM6 360 aaKnown RBP18.57■□□□□ 0.56
PTPN4-207ENST00000460162 H3BUX3 64 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 RASSF2P50749 326 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 AANATQ16613 207 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 ASRGL1Q7L266 308 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 UBE2FQ969M7 185 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 PKIBQ9C010 78 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 USE1Q9NZ43 259 aa18.56■□□□□ 0.56
PTPN4-207ENST00000460162 hCG_1809904A0A1W2PP81 198 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 A0A1W2PPE2 198 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 A0A1W2PR64 198 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 A0A1W2PRV1 198 aa18.55■□□□□ 0.56
PTPN4-207ENST00000460162 CEBPDP49716 269 aaPredicted RBP18.55■□□□□ 0.56
PTPN4-207ENST00000460162 IL24Q13007 206 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms