RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 KLF9Q13886 244 aaPredicted RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 TMEM200AQ86VY9 491 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 CHST4Q8NCG5 386 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 LILRB4Q8NHJ6 448 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 GPX8Q8TED1 209 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 RNASE6Q93091 150 aaKnown RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 Q96M66 194 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 C7orf50Q9BRJ6 194 aaKnown RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 RBFOX1Q9NWB1 397 aaKnown RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 MTFP1Q9UDX5 166 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 CACNG2Q9Y698 323 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 ESPL1Q14674 2120 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 FAM90A27PA6NNH2 459 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 ATP6V1G2-DDX39BF2Z307 99 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 SSX4O60224 188 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 GSTT2BP0CG30 244 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 SPNP16150 400 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 SRP9P49458 86 aaKnown RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 FABP6P51161 128 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 AP3S2P59780 193 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 DYRK1AQ13627 763 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 Q6ZTK2 550 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 MKXQ8IYA7 352 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 ZC3HAV1LQ96H79 300 aaKnown RBP20.86■□□□□ 0.93
U2AF1-204ENST00000459639 TMEM100Q9NV29 134 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 KLK11Q9UBX7 282 aa20.86■□□□□ 0.93
U2AF1-204ENST00000459639 FOXI3A8MTJ6 420 aaPredicted RBP20.85■□□□□ 0.93
U2AF1-204ENST00000459639 SOCS1O15524 211 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 RBBP9O75884 186 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 CYB5AP00167 134 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 LPLP06858 475 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 MELTFP08582 738 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 GSTP1P09211 210 aaKnown RBP20.85■□□□□ 0.93
U2AF1-204ENST00000459639 ZNF250P15622 560 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 GUCA2AQ02747 115 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 CDNFQ49AH0 187 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 CCBE1Q6UXH8 406 aaPredicted RBP20.85■□□□□ 0.93
U2AF1-204ENST00000459639 RAB3CQ96E17 227 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 LRRC46Q96FV0 321 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 PKIBQ9C010 78 aa20.85■□□□□ 0.93
U2AF1-204ENST00000459639 COL6A6A6NMZ7 2263 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 TMEM235A6NFC5 223 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 OR8G1Q15617 311 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 OSR2Q8N2R0 312 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 Q8NFD4 153 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 NUP37Q8NFH4 326 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 ENKURQ8TC29 256 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 SEH1LQ96EE3 360 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 OR51I2Q9H344 312 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 ZMAT3Q9HA38 289 aaKnown RBP20.84■□□□□ 0.93
U2AF1-204ENST00000459639 NGBQ9NPG2 151 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 TAS2R8Q9NYW2 309 aa20.84■□□□□ 0.93
U2AF1-204ENST00000459639 ERRFI1Q9UJM3 462 aaPredicted RBP20.84■□□□□ 0.93
U2AF1-204ENST00000459639 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.83■□□□□ 0.93
U2AF1-204ENST00000459639 ANKRD20A5PA0PJZ0 165 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 LRP5LA4QPB2 252 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 CENPXA8MT69 81 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 ATXN7O15265 892 aaPredicted RBP20.83■□□□□ 0.93
U2AF1-204ENST00000459639 AKR7A2O43488 359 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 HIST1H1DP16402 221 aaKnown RBP20.83■□□□□ 0.93
U2AF1-204ENST00000459639 MPZP25189 248 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 FAM76BQ5HYJ3 339 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 GALNT11Q8NCW6 608 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 DEDD2Q8WXF8 326 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 POM121Q96HA1 1249 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 RADILQ96JH8 1075 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 WFIKKN1Q96NZ8 548 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.83■□□□□ 0.93
U2AF1-204ENST00000459639 FZR1Q9UM11 496 aa20.83■□□□□ 0.93
U2AF1-204ENST00000459639 A0A1B0GWJ7 208 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 TMEM210A6NLX4 147 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 SFTPBP07988 381 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 TMEM50BP56557 158 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 ACTBP60709 375 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 ACTG1P63261 375 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 IL24Q13007 206 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 ARL6IP1Q15041 203 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 PLAC9Q5JTB6 97 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 ELP2Q6IA86 826 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 HAGHLQ6PII5 290 aaPredicted RBP20.83■□□□□ 0.92
U2AF1-204ENST00000459639 TMEM171Q8WVE6 324 aa20.83■□□□□ 0.92
U2AF1-204ENST00000459639 hCG_2014768A0A024R1R8 64 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 DPRXA6NFQ7 191 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 J3QT63 122 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 MFNGO00587 321 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 IGHV3-13P01766 116 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 CSF1P09603 554 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 GNB3P16520 340 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 ST3GAL2Q16842 350 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 MSMPQ1L6U9 139 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 CA5BP1Q8WTZ4 195 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 SLAMF9Q96A28 289 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 FAIMQ9NVQ4 179 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 NKIRAS2Q9NYR9 191 aa20.82■□□□□ 0.92
U2AF1-204ENST00000459639 NKX2-6A6NCS4 301 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 MLNRO43193 412 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 BLVRBP30043 206 aaPredicted RBP20.81■□□□□ 0.92
U2AF1-204ENST00000459639 KLF3P57682 345 aaPredicted RBP20.81■□□□□ 0.92
U2AF1-204ENST00000459639 SORDQ00796 357 aa20.81■□□□□ 0.92
U2AF1-204ENST00000459639 PNLIPRP3Q17RR3 467 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms