RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ANKRD61A6NGH8 418 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 E9PQ18 207 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 SYNGR1O43759 233 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 ENTPD6O75354 484 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 ACTC1P68032 377 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 ACTA1P68133 377 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 OCLNQ16625 522 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 TP53I3Q53FA7 332 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 METAP1DQ6UB28 335 aaPredicted RBP17.47■□□□□ 0.39
HMGB3-205ENST00000455596 ZNRF1Q8ND25 227 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 TMEM185AQ8NFB2 350 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 C9orf16Q9BUW7 83 aa17.47■□□□□ 0.39
HMGB3-205ENST00000455596 SNTNA6NMZ2 147 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 H3BSH0 61 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 PGA5P0DJD9 388 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 ISL1P61371 349 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 PDZD9Q8IXQ8 264 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 TRMT10AQ8TBZ6 339 aaKnown RBP17.46■□□□□ 0.39
HMGB3-205ENST00000455596 RNFT2Q96EX2 444 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 SDSLQ96GA7 329 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 ZNF488Q96MN9 340 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 S100A14Q9HCY8 104 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 SIRT7Q9NRC8 400 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 SLC7A11Q9UPY5 501 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 MAB21L2Q9Y586 359 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 GMPPBQ9Y5P6 360 aa17.46■□□□□ 0.39
HMGB3-205ENST00000455596 A0A1W2PQ09 198 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 DAPL1A0PJW8 107 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 RFPL4AA6NLU0 287 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 RFPL4AL1F8VTS6 287 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 NOS1APO75052 506 aaPredicted RBP17.45■□□□□ 0.38
HMGB3-205ENST00000455596 MELTFP08582 738 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 UBCP0CG48 685 aaKnown RBP17.45■□□□□ 0.38
HMGB3-205ENST00000455596 GUCA2AQ02747 115 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 KCTD20Q7Z5Y7 419 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 PRSS35Q8N3Z0 413 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 TMEM86BQ8N661 226 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 MBOAT4Q96T53 435 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 ELL3Q9HB65 397 aaPredicted RBP17.45■□□□□ 0.38
HMGB3-205ENST00000455596 TNFRSF19Q9NS68 423 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 PCDHGB1Q9Y5G3 927 aa17.45■□□□□ 0.38
HMGB3-205ENST00000455596 FAM230AA0A1W2PPH8 454 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 GATBO75879 557 aaKnown RBP17.44■□□□□ 0.38
HMGB3-205ENST00000455596 NXPH2O95156 264 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 MPZP25189 248 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 KIR3DL2P43630 455 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 CAPZA1P52907 286 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 CALHM1Q8IU99 346 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 ZNF561Q8N587 486 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 Q8N7P7 452 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 NPRL2Q8WTW4 380 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 C10orf35Q96D05 121 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 PKIBQ9C010 78 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 CAB39Q9Y376 341 aaPredicted RBP17.44■□□□□ 0.38
HMGB3-205ENST00000455596 POMT1Q9Y6A1 747 aa17.44■□□□□ 0.38
HMGB3-205ENST00000455596 TRBV23-1A0A0A0MS06 115 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 A0A0U1RQK1 487 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 LOC107986453A0A1B0GWG9 222 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 J3QRE1 110 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 M0R1W7 72 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 SLC1A7O00341 560 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 SERPINA3P01011 423 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 IL24Q13007 206 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 BLMHQ13867 455 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 UBE2V2Q15819 145 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 ZBTB49Q6ZSB9 765 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 C1orf122Q6ZSJ8 110 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 ANGPTL5Q86XS5 388 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 PQLC1Q8N2U9 271 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 PIP4P2Q8N4L2 257 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 CD177Q8N6Q3 437 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 TBC1D15Q8TC07 691 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 SSMEM1Q8WWF3 244 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 ZNF747Q9BV97 191 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 CHST5Q9GZS9 411 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 HES4Q9HCC6 221 aa17.43■□□□□ 0.38
HMGB3-205ENST00000455596 RNASEK-C17orf49H0YIS7 233 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 SLC16A6O15403 523 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 MPZL2O60487 215 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 CRYBA1P05813 215 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 EEF1B2P24534 225 aaKnown RBP17.42■□□□□ 0.38
HMGB3-205ENST00000455596 PRDX2P32119 198 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 FUT6P51993 359 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 TMEM244Q5VVB8 128 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 FIP1L1Q6UN15 594 aaKnown RBP17.42■□□□□ 0.38
HMGB3-205ENST00000455596 LDLRAD3Q86YD5 345 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 FAM185AQ8N0U4 392 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 BATF2Q8N1L9 274 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 ACBD7Q8N6N7 88 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 OR2G2Q8NGZ5 317 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 RNF166Q96A37 237 aaPredicted RBP17.42■□□□□ 0.38
HMGB3-205ENST00000455596 SLC29A1Q99808 456 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 CHIAQ9BZP6 476 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 METTL8Q9H825 291 aaKnown RBP17.42■□□□□ 0.38
HMGB3-205ENST00000455596 AASSQ9UDR5 926 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 EXOGQ9Y2C4 368 aaKnown RBP17.42■□□□□ 0.38
HMGB3-205ENST00000455596 FAM96BQ9Y3D0 163 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 DSCAML1Q8TD84 2053 aa17.42■□□□□ 0.38
HMGB3-205ENST00000455596 FAM181BA6NEQ2 426 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 414.2 ms