RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 THAP5Q7Z6K1 395 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 LHFPL4Q7Z7J7 247 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 CALHM1Q8IU99 346 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 ZNF679Q8IYX0 411 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 OR14K1Q8NGZ2 314 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 SSX3Q99909 188 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 ADGRL4Q9HBW9 690 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 GPR173Q9NS66 373 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 DNAJB9Q9UBS3 223 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 MRM2Q9UI43 246 aaKnown RBP13.02□□□□□ -0.33
GPC1-206ENST00000455111 POMPQ9Y244 141 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 V9GYS6 101 aa13.02□□□□□ -0.33
GPC1-206ENST00000455111 PLXNB1O43157 2135 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 ACOD1A6NK06 481 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
GPC1-206ENST00000455111 ERVK11-1P61568 191 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 RIPPLY1Q0D2K3 151 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 PLCXD3Q63HM9 321 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 NCR3LG1Q68D85 454 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 CCBE1Q6UXH8 406 aaPredicted RBP13.01□□□□□ -0.33
GPC1-206ENST00000455111 TCF23Q7RTU1 214 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 OR4M1Q8NGD0 313 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 OR5K1Q8NHB7 308 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 FAM81AQ8TBF8 368 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 CFHR4Q92496 578 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 RNF166Q96A37 237 aaPredicted RBP13.01□□□□□ -0.33
GPC1-206ENST00000455111 NRIP2Q9BQI9 281 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
GPC1-206ENST00000455111 CAB39Q9Y376 341 aaPredicted RBP13.01□□□□□ -0.33
GPC1-206ENST00000455111 IGKV1-27A0A075B6S5 117 aa13□□□□□ -0.33
GPC1-206ENST00000455111 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
GPC1-206ENST00000455111 MEX3AA1L020 520 aaKnown RBP13□□□□□ -0.33
GPC1-206ENST00000455111 OR5B21A6NL26 309 aa13□□□□□ -0.33
GPC1-206ENST00000455111 ANGPTL7O43827 346 aa13□□□□□ -0.33
GPC1-206ENST00000455111 E2F6O75461 281 aa13□□□□□ -0.33
GPC1-206ENST00000455111 DHRS3O75911 302 aa13□□□□□ -0.33
GPC1-206ENST00000455111 MPZP25189 248 aa13□□□□□ -0.33
GPC1-206ENST00000455111 PRDX2P32119 198 aa13□□□□□ -0.33
GPC1-206ENST00000455111 ZBTB37Q5TC79 503 aa13□□□□□ -0.33
GPC1-206ENST00000455111 C12orf73Q69YU5 71 aa13□□□□□ -0.33
GPC1-206ENST00000455111 KCTD18Q6PI47 426 aaPredicted RBP13□□□□□ -0.33
GPC1-206ENST00000455111 SPATA24Q86W54 205 aa13□□□□□ -0.33
GPC1-206ENST00000455111 ELMOD2Q8IZ81 293 aa13□□□□□ -0.33
GPC1-206ENST00000455111 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
GPC1-206ENST00000455111 HIST1H2AAQ96QV6 131 aa13□□□□□ -0.33
GPC1-206ENST00000455111 MROQ9BYG7 248 aa13□□□□□ -0.33
GPC1-206ENST00000455111 FAM90A8PA6NJQ4 464 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 G3V4G9 280 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 H0YAE9 185 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 J3QT63 122 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ZNF254O75437 659 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 NRASP01111 189 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ATP6V1B1P15313 513 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 JUNBP17275 347 aaPredicted RBP12.99□□□□□ -0.33
GPC1-206ENST00000455111 KIR2DS4P43632 304 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 HAAOP46952 286 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 CXCR4P61073 352 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 FLOT2Q14254 428 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 HABP2Q14520 560 aaPredicted RBP12.99□□□□□ -0.33
GPC1-206ENST00000455111 SLX4IPQ5VYV7 408 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ZNF322Q6U7Q0 402 aaPredicted RBP12.99□□□□□ -0.33
GPC1-206ENST00000455111 ANGPTL5Q86XS5 388 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ZNF671Q8TAW3 534 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 UBE2FQ969M7 185 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ZNF556Q9HAH1 456 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 PAPOLBQ9NRJ5 636 aaKnown RBP12.99□□□□□ -0.33
GPC1-206ENST00000455111 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ENPP5Q9UJA9 477 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 SF3B6Q9Y3B4 125 aaKnown RBP12.99□□□□□ -0.33
GPC1-206ENST00000455111 R4GMQ9 66 aa12.99□□□□□ -0.33
GPC1-206ENST00000455111 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 H3BSH0 61 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 ZNF737O75373 536 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 PAHP00439 452 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 COX7A1P24310 79 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 GABRA5P31644 462 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 RAB13P51153 203 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 RIDAP52758 137 aaKnown RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 RPL31P62899 125 aaKnown RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 LRRC75BQ2VPJ9 315 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 ZNF782Q6ZMW2 699 aaPredicted RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 MEPCEQ7L2J0 689 aaKnown RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 SLC35F2Q8IXU6 374 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 TCEANCQ8N8B7 351 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 NRBF2Q96F24 287 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
GPC1-206ENST00000455111 ZNF702PQ9H963 129 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 IKZF2Q9UKS7 526 aa12.98□□□□□ -0.33
GPC1-206ENST00000455111 A0A0G2JK05 382 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 BTBD17A6NE02 478 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 ANKRD61A6NGH8 418 aa12.97□□□□□ -0.33
GPC1-206ENST00000455111 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms