RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
CHD3-206ENST00000452447 METTL8Q9H825 291 aaKnown RBP10.59□□□□□ -0.71
CHD3-206ENST00000452447 C1RLQ9NZP8 487 aa10.59□□□□□ -0.71
CHD3-206ENST00000452447 MRM2Q9UI43 246 aaKnown RBP10.59□□□□□ -0.71
CHD3-206ENST00000452447 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 M0R1W7 72 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 NPFFO15130 113 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 RPP14O95059 124 aaKnown RBP10.58□□□□□ -0.72
CHD3-206ENST00000452447 NDUFA7O95182 113 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 PAHP00439 452 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 ATP6V1E1P36543 226 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 PRB3Q04118 309 aaPredicted RBP10.58□□□□□ -0.72
CHD3-206ENST00000452447 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 Q8N7P7 452 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 CENPNQ96H22 339 aaPredicted RBP10.58□□□□□ -0.72
CHD3-206ENST00000452447 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 GPR173Q9NS66 373 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD3-206ENST00000452447 OAZ3Q9UMX2 235 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 POLDIP2Q9Y2S7 368 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 V9GYS6 101 aa10.58□□□□□ -0.72
CHD3-206ENST00000452447 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PRD5 423 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PRF3 423 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PRM7 423 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 MEIOCA2RUB1 952 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 CLPSL1A2RUU4 121 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 A6NIN4 97 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 RFPL4AA6NLU0 287 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 DHRS7CA6NNS2 312 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 RFPL4AL1F8VTS6 287 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 H0YAE9 185 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 SLC1A7O00341 560 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 GPR137BO60478 399 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OR2T7P0C7T2 308 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 HTR1FP30939 366 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 DLX1P56177 255 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 RELBQ01201 579 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OLFML2AQ68BL7 652 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 TMEM42Q69YG0 159 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 FAM185AQ8N0U4 392 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 POC1AQ8NBT0 407 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OR10H4Q8NGA5 316 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OR8J1Q8NGP2 316 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OR14K1Q8NGZ2 314 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 OR2T27Q8NH04 317 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 ADI1Q9BV57 179 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 PLEKHA1Q9HB21 404 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 ELL3Q9HB65 397 aaPredicted RBP10.57□□□□□ -0.72
CHD3-206ENST00000452447 ZNF222Q9UK12 451 aa10.57□□□□□ -0.72
CHD3-206ENST00000452447 A0A1B0GTI1 187 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PPH5 198 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PQL4 384 aaPredicted RBP10.56□□□□□ -0.72
CHD3-206ENST00000452447 J3QT63 122 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 NXPH2O95156 264 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 PGA5P0DJD9 388 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
CHD3-206ENST00000452447 UBE2E1P51965 193 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 KLRD1Q13241 179 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ODF4Q2M2E3 257 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 GDPGP1Q6ZNW5 385 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SSX6Q7RTT6 188 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 OR5D13Q8NGL4 314 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 TNFRSF14Q92956 283 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 RFKQ969G6 155 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ZNF488Q96MN9 340 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 RBM4BQ9BQ04 359 aaKnown RBP10.56□□□□□ -0.72
CHD3-206ENST00000452447 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 GABARAPL3Q9BY60 117 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ZNRD1Q9P1U0 126 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SLC7A11Q9UPY5 501 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SLC22A13Q9Y226 551 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 PQLC2LA1A4F0 135 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ANKRD61A6NGH8 418 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 METTL15A6NJ78 407 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SYT7O43581 403 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SYNGR1O43759 233 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SULT1C4O75897 302 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 APOL3O95236 402 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 PRDX2P32119 198 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SAA4P35542 130 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 CDC42P60953 191 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ACSM1Q08AH1 577 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 TMED1Q13445 227 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 ZFP1Q6P2D0 407 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 BRICD5Q6PL45 260 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 SF3B6Q9Y3B4 125 aaKnown RBP10.56□□□□□ -0.72
CHD3-206ENST00000452447 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
CHD3-206ENST00000452447 hCG_1809904A0A1W2PP81 198 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PPE2 198 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 FAM230AA0A1W2PPH8 454 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PR64 198 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 A0A1W2PRV1 198 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms