RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 GABRA2P47869 451 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 RPL15P61313 204 aaKnown RBP15.92■□□□□ 0.14
USP40-207ENST00000450940 KPNB1Q14974 876 aaKnown RBP15.92■□□□□ 0.14
USP40-207ENST00000450940 ZNRF1Q8ND25 227 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 CCDC54Q8NEL0 328 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 OR10H4Q8NGA5 316 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 H1FXQ92522 213 aaKnown RBP15.92■□□□□ 0.14
USP40-207ENST00000450940 UBE2FQ969M7 185 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 RNF166Q96A37 237 aaPredicted RBP15.92■□□□□ 0.14
USP40-207ENST00000450940 CHIAQ9BZP6 476 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 HES4Q9HCC6 221 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 GPR173Q9NS66 373 aa15.92■□□□□ 0.14
USP40-207ENST00000450940 TRBV23-1A0A0A0MS06 115 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 RNASEK-C17orf49H0YIS7 233 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 J3QRE1 110 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 SYNGR1O43759 233 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 APOL3O95236 402 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 NDUFB7P17568 137 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 ATP6V1E1P36543 226 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 IER3P46695 156 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 SNRPGP62308 76 aaKnown RBP15.91■□□□□ 0.14
USP40-207ENST00000450940 GUCA2AQ02747 115 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 ZNF85Q03923 595 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 SMIM21Q3B7S5 101 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 CCDC121Q6ZUS5 278 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 CD177Q8N6Q3 437 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 TBC1D15Q8TC07 691 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 NRIP2Q9BQI9 281 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP40-207ENST00000450940 POLDIP2Q9Y2S7 368 aa15.91■□□□□ 0.14
USP40-207ENST00000450940 ANKRD61A6NGH8 418 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 A6NIN4 97 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 RFPL4AA6NLU0 287 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 RFPL4AL1F8VTS6 287 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 EI24O14681 340 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 ALDH3A2P51648 485 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 ERVK11-1P61568 191 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 OCLNQ16625 522 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 FIP1L1Q6UN15 594 aaKnown RBP15.9■□□□□ 0.14
USP40-207ENST00000450940 C10orf67Q8IYJ2 551 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 PRSS35Q8N3Z0 413 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 TAF15Q92804 592 aaKnown RBP eCLIP15.9■□□□□ 0.14
USP40-207ENST00000450940 ZNF488Q96MN9 340 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 PKIBQ9C010 78 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 SLITRK2Q9H156 845 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 METTL8Q9H825 291 aaKnown RBP15.9■□□□□ 0.14
USP40-207ENST00000450940 SIRT7Q9NRC8 400 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 IMPAD1Q9NX62 359 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 ORC6Q9Y5N6 252 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 MGAM2Q2M2H8 2515 aa15.9■□□□□ 0.14
USP40-207ENST00000450940 A0A1B0GUS0 222 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 SYT7O43581 403 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 ENTPD6O75354 484 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 NDUFA7O95182 113 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 MDKP21741 143 aaPredicted RBP15.89■□□□□ 0.13
USP40-207ENST00000450940 PRDX2P32119 198 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 IL24Q13007 206 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 UBE2V2Q15819 145 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 MEDAGQ5VYS4 303 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 FDX2Q6P4F2 183 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 KCTD20Q7Z5Y7 419 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 CALHM1Q8IU99 346 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 PDZD9Q8IXQ8 264 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 ZNF561Q8N587 486 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 DYRK2Q92630 601 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 C10orf35Q96D05 121 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 ELL3Q9HB65 397 aaPredicted RBP15.89■□□□□ 0.13
USP40-207ENST00000450940 C1RLQ9NZP8 487 aa15.89■□□□□ 0.13
USP40-207ENST00000450940 A0A1W2PQ09 198 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 NPFFO15130 113 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 IGHV4-59P01825 116 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 KIR3DL2P43630 455 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 UBE2E1P51965 193 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 RELBQ01201 579 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 PRR31Q5SQ13 230 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 NCR3LG1Q68D85 454 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 TMEM185AQ8NFB2 350 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 CHST5Q9GZS9 411 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 ZNF696Q9H7X3 374 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 TNFRSF19Q9NS68 423 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 CAB39Q9Y376 341 aaPredicted RBP15.88■□□□□ 0.13
USP40-207ENST00000450940 FAM96BQ9Y3D0 163 aa15.88■□□□□ 0.13
USP40-207ENST00000450940 DSCAML1Q8TD84 2053 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 SPRY1O43609 319 aaPredicted RBP15.87■□□□□ 0.13
USP40-207ENST00000450940 NXPH2O95156 264 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 FBP1P09467 338 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 UBCP0CG48 685 aaKnown RBP15.87■□□□□ 0.13
USP40-207ENST00000450940 OMGP23515 440 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 EEF1B2P24534 225 aaKnown RBP15.87■□□□□ 0.13
USP40-207ENST00000450940 FUT6P51993 359 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 DLX1P56177 255 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ACTC1P68032 377 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ACTA1P68133 377 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ACSM1Q08AH1 577 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 BLMHQ13867 455 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ODF4Q2M2E3 257 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ZIK1Q3SY52 487 aaPredicted RBP15.87■□□□□ 0.13
USP40-207ENST00000450940 TP53I3Q53FA7 332 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 ANGPTL5Q86XS5 388 aa15.87■□□□□ 0.13
USP40-207ENST00000450940 CBR4Q8N4T8 237 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms