RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TMEM42Q69YG0 159 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 METAP1DQ6UB28 335 aaPredicted RBP12.56□□□□□ -0.4
CHD3-205ENST00000449744 ACP7Q6ZNF0 438 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 FAM220AQ7Z4H9 259 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 ZNRF1Q8ND25 227 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 OR4F5Q8NH21 305 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 SLC7A11Q9UPY5 501 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 MAB21L2Q9Y586 359 aa12.56□□□□□ -0.4
CHD3-205ENST00000449744 A0A1B0GUS0 222 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 ANKRD61A6NGH8 418 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 RFPL4AA6NLU0 287 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 RFPL4AL1F8VTS6 287 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 M0R1W7 72 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 SYT7O43581 403 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 SYNGR1O43759 233 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 SULT1C4O75897 302 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 PRB3Q04118 309 aaPredicted RBP12.55□□□□□ -0.4
CHD3-205ENST00000449744 FAM185AQ8N0U4 392 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
CHD3-205ENST00000449744 EME1Q96AY2 570 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 SDSLQ96GA7 329 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 ZNF488Q96MN9 340 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 METTL8Q9H825 291 aaKnown RBP12.55□□□□□ -0.4
CHD3-205ENST00000449744 ELL3Q9HB65 397 aaPredicted RBP12.55□□□□□ -0.4
CHD3-205ENST00000449744 BEX1Q9HBH7 125 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 ZNF222Q9UK12 451 aa12.55□□□□□ -0.4
CHD3-205ENST00000449744 TENM1Q9UKZ4 2725 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 TRBV23-1A0A0A0MS06 115 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 FAM230AA0A1W2PPH8 454 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 H0YAE9 185 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 RNASEK-C17orf49H0YIS7 233 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 H3BSH0 61 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 SLC1A7O00341 560 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 NPFFO15130 113 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 NXPH2O95156 264 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 FBP1P09467 338 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 CCL1P22362 96 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 PRDX2P32119 198 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 RAG2P55895 527 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 KPNB1Q14974 876 aaKnown RBP12.54□□□□□ -0.4
CHD3-205ENST00000449744 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 ZFP1Q6P2D0 407 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 CATSPERDQ86XM0 798 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 ZNF561Q8N587 486 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 Q8N7P7 452 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 CCDC54Q8NEL0 328 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 TRMT10AQ8TBZ6 339 aaKnown RBP12.54□□□□□ -0.4
CHD3-205ENST00000449744 DYRK2Q92630 601 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 RORBQ92753 470 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 GNG8Q9UK08 70 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
CHD3-205ENST00000449744 A0A1W2PPH5 198 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 EI24O14681 340 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
CHD3-205ENST00000449744 GATBO75879 557 aaKnown RBP12.53□□□□□ -0.4
CHD3-205ENST00000449744 PAHP00439 452 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 SERPINA3P01011 423 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 KNG1P01042 644 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 ALPLP05186 524 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 IER3P46695 156 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 DLX1P56177 255 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
CHD3-205ENST00000449744 KLRD1Q13241 179 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
CHD3-205ENST00000449744 C17orf107Q6ZR85 190 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 Q6ZSR3 168 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 C1RLQ9NZP8 487 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 OR14J1Q9UGF5 321 aa12.53□□□□□ -0.4
CHD3-205ENST00000449744 MEIOCA2RUB1 952 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 SNTNA6NMZ2 147 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 GPR137BO60478 399 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 NDUFA7O95182 113 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
CHD3-205ENST00000449744 ALDH3A2P51648 485 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 UBE2E1P51965 193 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 ACTC1P68032 377 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 ACTA1P68133 377 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 ZNF85Q03923 595 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 TP53I3Q53FA7 332 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.41
CHD3-205ENST00000449744 CD177Q8N6Q3 437 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms