RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TSC22D1Q15714 1073 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 NKPD1Q17RQ9 610 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 TBC1D28Q2M2D7 210 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 CEACAM21Q3KPI0 293 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 CD163Q86VB7 1156 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 CALHM1Q8IU99 346 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 PRRT1Q99946 306 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 ALX4Q9H161 411 aaPredicted RBP15.24■□□□□ 0.03
LMNA-208ENST00000448611 EIF3KQ9UBQ5 218 aaKnown RBP15.24■□□□□ 0.03
LMNA-208ENST00000448611 PLEKHA6Q9Y2H5 1048 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 CACNA1GO43497 2377 aa15.24■□□□□ 0.03
LMNA-208ENST00000448611 CD300LBA8K4G0 201 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 CREBL2O60519 120 aaPredicted RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 CA11O75493 328 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 CGAP01215 116 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 CSN2P05814 226 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 GABRR1P24046 479 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ERP29P30040 261 aaKnown RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 CBX5P45973 191 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ZMYND11Q15326 602 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 SIGIRRQ6IA17 410 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 RTL6Q6ICC9 239 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 INO80CQ6PI98 192 aaPredicted RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 C1orf162Q8NEQ5 155 aaPredicted RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 OR5L1Q8NGL2 311 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 STARD4Q96DR4 205 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 CHST6Q9GZX3 395 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ZNF69Q9UC07 566 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ZNF629Q9UEG4 869 aaPredicted RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 NPTNQ9Y639 398 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 J3QW42 95 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 FABP7O15540 132 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 AKR7A2O43488 359 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 TOXO94900 526 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 CXADRP78310 365 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 MRPS15P82914 257 aaKnown RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 SF3B4Q15427 424 aaKnown RBP eCLIP15.23■□□□□ 0.034e-7■■■■□ 23.7
LMNA-208ENST00000448611 SCGB2B2Q4G0G5 96 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 C6orf201Q7Z4U5 140 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ZDHHC23Q8IYP9 409 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 FTMTQ8N4E7 242 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 ZSCAN4Q8NAM6 433 aaPredicted RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 OR52B4Q8NGK2 314 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 OR4K15Q8NH41 348 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 OR51F2Q8NH61 342 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 MRGPRFQ96AM1 343 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 MRPS24Q96EL2 167 aaKnown RBP15.23■□□□□ 0.03
LMNA-208ENST00000448611 ABHD17AQ96GS6 310 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 OR51B6Q9H340 312 aa15.23■□□□□ 0.03
LMNA-208ENST00000448611 TMEM82A0PJX8 343 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 SFTPBP07988 381 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 IDH3GP51553 393 aaPredicted RBP15.22■□□□□ 0.03
LMNA-208ENST00000448611 TMPRSS3P57727 454 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 PPA1Q15181 289 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 TAF9Q16594 264 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 MICBQ29980 383 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 ATPAF1Q5TC12 328 aaPredicted RBP15.22■□□□□ 0.03
LMNA-208ENST00000448611 HOGA1Q86XE5 327 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 ZNF611Q8N823 705 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 WDR31Q8NA23 367 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 NAXEQ8NCW5 288 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 HSF4Q9ULV5 492 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 FAM215AQ9Y5M1 114 aa15.22■□□□□ 0.03
LMNA-208ENST00000448611 FIGNL2A6NMB9 653 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 K7ENP7 123 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 PMP2P02689 132 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 PER3P56645 1201 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 IFITM2Q01629 132 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 SLC25A26Q70HW3 274 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 OSR2Q8N2R0 312 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 SPICQ8N5J4 248 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 ZNF610Q8N9Z0 462 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 CAPSLQ8WWF8 208 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 MYOZ1Q9NP98 299 aaPredicted RBP15.21■□□□□ 0.03
LMNA-208ENST00000448611 PLEKHJ1Q9NW61 149 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 ZNF581Q9P0T4 197 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
LMNA-208ENST00000448611 SMPD2O60906 423 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 LILRA1O75019 489 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 WDR1O75083 606 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 CBR1P16152 277 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 GPM6AP51674 278 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 UCNP55089 124 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 MRPL49Q13405 166 aaKnown RBP15.21■□□□□ 0.02
LMNA-208ENST00000448611 PIGYQ3MUY2 71 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 ACTBL2Q562R1 376 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 NKAPLQ5M9Q1 402 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 VAX1Q5SQQ9 334 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 FBXL14Q8N1E6 418 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 Q8NFD4 153 aa15.21■□□□□ 0.02
LMNA-208ENST00000448611 ZNF436Q9C0F3 470 aaPredicted RBP15.21■□□□□ 0.02
LMNA-208ENST00000448611 OPN3Q9H1Y3 402 aaPredicted RBP15.21■□□□□ 0.02
LMNA-208ENST00000448611 TMEM8BA6NDV4 472 aa15.2■□□□□ 0.02
LMNA-208ENST00000448611 KRTCAP3Q53RY4 240 aa15.2■□□□□ 0.02
LMNA-208ENST00000448611 SPATA46Q5T0L3 261 aa15.2■□□□□ 0.02
LMNA-208ENST00000448611 ZNF324BQ6AW86 544 aaPredicted RBP15.2■□□□□ 0.02
LMNA-208ENST00000448611 FBXW12Q6X9E4 464 aa15.2■□□□□ 0.02
LMNA-208ENST00000448611 CXorf67Q86X51 503 aaPredicted RBP15.2■□□□□ 0.02
LMNA-208ENST00000448611 BHLHE23Q8NDY6 225 aa15.2■□□□□ 0.02
LMNA-208ENST00000448611 OR5A2Q8NGI9 324 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms