RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PECRQ9BY49 303 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 SLCO5A1Q9H2Y9 848 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 LIME1Q9H400 295 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 IFT22Q9H7X7 185 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 A0A0A6YYH2 397 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 A6NJ64 397 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 A8MXK9 166 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 SFTPBP07988 381 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 LUMP51884 338 aaPredicted RBP12.87□□□□□ -0.35
SF1-211ENST00000448404 GFRA1P56159 465 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 DHODHQ02127 395 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 OR1C1Q15619 314 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 PABPC1L2AQ5JQF8 200 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 TMEM200AQ86VY9 491 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 SEMA6DQ8NFY4 1073 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 OR2M7Q8NG81 312 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 GPR35Q9HC97 309 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 MBD2Q9UBB5 411 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 GPR160Q9UJ42 338 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 PCDHGA1Q9Y5H4 931 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 V9GYS6 101 aa12.87□□□□□ -0.35
SF1-211ENST00000448404 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 TNFSF15O95150 251 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 GP1BAP07359 652 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HIST1H3AP68431 136 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 SSBP1Q04837 148 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 MEF2DQ14814 521 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HIST2H3AQ71DI3 136 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 GLS2Q9UI32 602 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 PRELID3BQ9Y3B1 194 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HSPB6O14558 160 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 EDN3P14138 238 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 DEFA5Q01523 94 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 ABHD17BQ5VST6 288 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 OR5H2Q8NGV7 314 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 C12orf57Q99622 126 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 PRRG4Q9BZD6 226 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 SPRY4Q9C004 299 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 ALX4Q9H161 411 aaPredicted RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 PLEKHJ1Q9NW61 149 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 A0A1W2PR80 420 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 RFPL4AA6NLU0 287 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 RFPL4AL1F8VTS6 287 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HOXB5P09067 269 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 PRF1P14222 555 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 OR3A2P47893 321 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 PMP22Q01453 160 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 IGSF11Q5DX21 431 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HES3Q5TGS1 186 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 BVESQ8NE79 360 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 HAS2Q92819 552 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 GPHA2Q96T91 129 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 URM1Q9BTM9 101 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 OR2H1Q9GZK4 316 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
SF1-211ENST00000448404 NOSIPQ9Y314 301 aaKnown RBP12.86□□□□□ -0.35
SF1-211ENST00000448404 RNF222A6NCQ9 220 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 PGAM2P15259 253 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 CTSSP25774 331 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 NPBWR2P48146 333 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 NOVA1P51513 510 aaKnown RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 SPEM2Q0P670 501 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 RTBDNQ9BSG5 229 aaPredicted RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 A0A0U1RQV5 110 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 F8VVB4 439 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 F8VWA3 439 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 NGFP01138 241 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 SERPINA5P05154 406 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 CHRM2P08172 466 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 DUSP1P28562 367 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 THBS4P35443 961 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 DRAM2Q6UX65 266 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 MARS2Q96GW9 593 aaKnown RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 TTTY12Q9BZ98 90 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 ZNF703Q9H7S9 590 aaPredicted RBP12.85□□□□□ -0.35
SF1-211ENST00000448404 GSKIPQ9P0R6 139 aa12.85□□□□□ -0.35
SF1-211ENST00000448404 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms