RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TPD52L2O43399 206 aaKnown RBP16.55■□□□□ 0.24
SGCE-207ENST00000447873 SOD3P08294 240 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 UBBP0CG47 229 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 SCAND1P57086 179 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 RSU1Q15404 277 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 FAM209AQ5JX71 171 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 DTX2Q86UW9 622 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 TMEM200AQ86VY9 491 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 PXT1Q8NFP0 134 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 OR5H6Q8NGV6 325 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 ITLN1Q8WWA0 313 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 EGLN1Q9GZT9 426 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 METTL9Q9H1A3 318 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 UFSP2Q9NUQ7 469 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 LAMP3Q9UQV4 416 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 SYNGR1O43759 233 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 PTBP3O95758 552 aaKnown RBP16.55■□□□□ 0.24
SGCE-207ENST00000447873 CD8AP01732 235 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 CD55P08174 381 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 MPZP25189 248 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 PPOXP50336 477 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 CCL8P80075 99 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 IL24Q13007 206 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 MPPED2Q15777 294 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 PCGF3Q3KNV8 242 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 SLC22A6Q4U2R8 563 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 SAXO1Q8IYX7 474 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 SAMD12Q8N8I0 201 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 AQP3Q92482 292 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 VRK1Q99986 396 aaPredicted RBP16.55■□□□□ 0.24
SGCE-207ENST00000447873 TLNRD1Q9H1K6 362 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 KCNK15Q9H427 330 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 DECR2Q9NUI1 292 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 POLDIP2Q9Y2S7 368 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 ETV7Q9Y603 341 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 TNFRSF1AP19438 455 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 S100A5P33763 92 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 SLAMF9Q96A28 289 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 C1orf147Q96MC9 270 aaPredicted RBP16.54■□□□□ 0.24
SGCE-207ENST00000447873 TRAF4Q9BUZ4 470 aaPredicted RBP16.54■□□□□ 0.24
SGCE-207ENST00000447873 CST11Q9H112 138 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 PEX16Q9Y5Y5 336 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 CRYBG3Q68DQ2 2970 aa16.54■□□□□ 0.24
SGCE-207ENST00000447873 DSCAMO60469 2012 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 IGKV1-12A0A0C4DH73 117 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 TMEM272A0A1B0GTI8 110 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 HPGDSO60760 199 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 ZNF780AO75290 641 aaPredicted RBP16.53■□□□□ 0.24
SGCE-207ENST00000447873 RHBDL1O75783 438 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 IGKV1D-12P01611 117 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 CSTBP04080 98 aaKnown RBP16.53■□□□□ 0.24
SGCE-207ENST00000447873 VSIG8P0DPA2 414 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 SERPINA2P20848 420 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 GATA4P43694 442 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 GPR176Q14439 515 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 TESK1Q15569 626 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 SPRNQ5BIV9 151 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 OR10K2Q6IF99 312 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 C11orf71Q6IPW1 123 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 ASCL4Q6XD76 172 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 MOGAT3Q86VF5 341 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 C11orf53Q8IXP5 236 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 OR10K1Q8NGX5 313 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 KCNG3Q8TAE7 436 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 FAM46BQ96A09 425 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 PLEKHF2Q9H8W4 249 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 FN3KRPQ9HA64 309 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 SAP30LQ9HAJ7 183 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 PCDHB16Q9NRJ7 776 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 C1orf123Q9NWV4 160 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 MTCH1Q9NZJ7 389 aa16.53■□□□□ 0.24
SGCE-207ENST00000447873 hCG_1807616A0A1W2PRN6 198 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 TRAPPC2LH3BP13 241 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 CRTAPO75718 401 aaPredicted RBP16.52■□□□□ 0.24
SGCE-207ENST00000447873 HTR3BO95264 441 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 QRFPP83859 136 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 ZNF826PQ6ZT77 177 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 OR2W3Q7Z3T1 314 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 ZNF295-AS1Q8N0V1 137 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 OR6Q1Q8NGQ2 317 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 IL36GQ9NZH8 169 aa16.52■□□□□ 0.24
SGCE-207ENST00000447873 LDLRAD4O15165 306 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 KDM4BO94953 1096 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 ART1P52961 327 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 UNC119Q13432 240 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 UBE2NLQ5JXB2 153 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 WDR82Q6UXN9 313 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 C20orf204Q6ZNR8 217 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 LAX1Q8IWV1 398 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 TMEM104Q8NE00 496 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 ERGIC1Q969X5 290 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 CEP19Q96LK0 163 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 CMTM3Q96MX0 182 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 CACNG6Q9BXT2 260 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 GCM1Q9NP62 436 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 FBLN5Q9UBX5 448 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 ADAM30Q9UKF2 790 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 RAB22AQ9UL26 194 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 CENPEQ02224 2701 aa16.51■□□□□ 0.23
SGCE-207ENST00000447873 A0A1W2PP11 408 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms