RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR8B12Q8NGG6 310 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 OR6N2Q8NGY6 317 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 ITFG2Q969R8 447 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 OR8B4Q96RC9 309 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 FGFR1OP2Q9NVK5 253 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 OR5B21A6NL26 309 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 K7N7A8 449 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 CLIC3O95833 236 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 GASTP01350 101 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 H2BFMP0C1H6 154 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF728P0DKX0 622 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 IGHV1-8P0DP01 117 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 CEBPDP49716 269 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-208ENST00000443046 OR12D2P58182 307 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 HAGHLQ6PII5 290 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-208ENST00000443046 SHFQ7M4L6 423 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 LINC00471Q8N535 108 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 OR9Q2Q8NGE9 314 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 DPF1Q92782 380 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF488Q96MN9 340 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 TSSK6Q9BXA6 273 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 C1orf21Q9H246 121 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 VIPAS39Q9H9C1 493 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 IL1RAPQ9NPH3 570 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-208ENST00000443046 BAIAP2Q9UQB8 552 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 V9GYQ6 96 aa11.48□□□□□ -0.57
HMGN1-208ENST00000443046 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 FABP3P05413 133 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 GSTT1P30711 240 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 MAP2K3P46734 347 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 NUDT2P50583 147 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
HMGN1-208ENST00000443046 PSME3P61289 254 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 DMRTC1Q5HYR2 192 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 OTOSQ8NHW6 89 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 NRIP2Q9BQI9 281 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 CMC2Q9NRP2 79 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 LSM4Q9Y4Z0 139 aaKnown RBP11.47□□□□□ -0.57
HMGN1-208ENST00000443046 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
HMGN1-208ENST00000443046 A0A0U1RQV5 110 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF737O75373 536 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 KRT36O76013 467 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 IGLV3-1P01715 115 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 AMY1AP04745 511 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 AMY2AP04746 511 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 LYNP07948 512 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 CHRM2P08172 466 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 PIPP12273 146 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-208ENST00000443046 THBS3P49746 956 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 SLC34A1Q06495 639 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-208ENST00000443046 OR2T33Q8NG76 320 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.57
HMGN1-208ENST00000443046 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 MED20Q9H944 212 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 TBC1D23Q9NUY8 699 aa11.46□□□□□ -0.57
HMGN1-208ENST00000443046 FAM183AA6NL82 134 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 H0YHG0 523 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 H3BUI4 141 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 ZFPL1O95159 310 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 CCDC159P0C7I6 412 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 ATP6V1B1P15313 513 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 ERVK11-1P61568 191 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 DYNC1I2Q13409 638 aaKnown RBP11.45□□□□□ -0.58
HMGN1-208ENST00000443046 MOB3CQ70IA8 216 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 MCUR1Q96AQ8 359 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 NIPAL2Q9H841 368 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 SPAG4Q9NPE6 437 aa11.45□□□□□ -0.58
HMGN1-208ENST00000443046 IGHV2-26A0A0B4J1V2 119 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ACOD1A6NK06 481 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 RIIAD1A6NNX1 92 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 J3QT63 122 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 GMNNO75496 209 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 IFNGP01579 166 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 LPLP06858 475 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF3P17036 446 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 MPZP25189 248 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 LMO1P25800 156 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ACTA2P62736 377 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ACTG2P63267 376 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ACTC1P68032 377 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ACTA1P68133 377 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 DGCR2P98153 550 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ABCA11PQ4W5N1 156 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 SAMD4BQ5PRF9 694 aaKnown RBP11.44□□□□□ -0.58
HMGN1-208ENST00000443046 CASC10Q5T4H9 136 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF573Q86YE8 665 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 OSR2Q8N2R0 312 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 RNF148Q8N7C7 305 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms