RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 C2orf68Q2NKX9 166 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 SLX4IPQ5VYV7 408 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 NXNL2Q5VZ03 156 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 Q6ZTK2 550 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 WDR86Q86TI4 376 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 ENTHD1Q8IYW4 607 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 FAM216BQ8N7L0 139 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 POC1AQ8NBT0 407 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 BEND2Q8NDZ0 799 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 TMEM185AQ8NFB2 350 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 OR5T2Q8NGG2 359 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 OR51G2Q8NGK0 314 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 RFKQ969G6 155 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 C10orf35Q96D05 121 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 DUS3LQ96G46 650 aaKnown RBP6.39□□□□□ -1.39
CD44-211ENST00000442151 GAFA1Q96PS6 74 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 AMELYQ99218 206 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 MEGF9Q9H1U4 602 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 RANBP3Q9H6Z4 567 aaPredicted RBP6.39□□□□□ -1.39
CD44-211ENST00000442151 GPR84Q9NQS5 396 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 SNTG1Q9NSN8 517 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 FAM206AQ9NX38 181 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 USE1Q9NZ43 259 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 FBLN5Q9UBX5 448 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 WARS2Q9UGM6 360 aaKnown RBP6.39□□□□□ -1.39
CD44-211ENST00000442151 R4GMQ9 66 aa6.39□□□□□ -1.39
CD44-211ENST00000442151 C5orf63A6NC05 138 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 SNTNA6NMZ2 147 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 NXPH2O95156 264 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 IGHV4-59P01825 116 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 OR2T7P0C7T2 308 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 PSG2P11465 335 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 PSKH1P11801 424 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 SLC2A5P22732 501 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 PRDX2P32119 198 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 GMFBP60983 142 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 RPL31P62899 125 aaKnown RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 PTGES3Q15185 160 aaKnown RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 HAGHLQ6PII5 290 aaPredicted RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 ZNF322Q6U7Q0 402 aaPredicted RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 PLEKHG7Q6ZR37 379 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 KCTD20Q7Z5Y7 419 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 FAM185AQ8N0U4 392 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 OR4C13Q8NGP0 309 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 OR13D1Q8NGV5 346 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 OR2T27Q8NH04 317 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 LINC01006Q8NI28 216 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 BCAS4Q8TDM0 211 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 AQP3Q92482 292 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 FOXRED1Q96CU9 486 aaPredicted RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 LYZL4Q96KX0 146 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 CDCA4Q9BXL8 241 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 PKIBQ9C010 78 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 SEBOXQ9HB31 216 aaPredicted RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 ABCB10Q9NRK6 738 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 CLN6Q9NWW5 311 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 ZNRD1Q9P1U0 126 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 PITPNC1Q9UKF7 332 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 OR52A1Q9UKL2 312 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 POMPQ9Y244 141 aa6.38□□□□□ -1.39
CD44-211ENST00000442151 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
CD44-211ENST00000442151 FUOMA2VDF0 154 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.37□□□□□ -1.39
CD44-211ENST00000442151 SULT1C4O75897 302 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 RBP4P02753 201 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ALDOBP05062 364 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 PRKACGP22612 351 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ACKR3P25106 362 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
CD44-211ENST00000442151 KIR2DS4P43632 304 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ARHGDIBP52566 201 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 DGUOKQ16854 277 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 LRRC75BQ2VPJ9 315 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 CEP78Q5JTW2 689 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 FAHD1Q6P587 224 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ACP7Q6ZNF0 438 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ZBTB49Q6ZSB9 765 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 TMEM179BQ7Z7N9 219 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 EGFL6Q8IUX8 553 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 SLC35F2Q8IXU6 374 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 Q8IYB0 196 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ELMOD2Q8IZ81 293 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 OR2T6Q8NHC8 308 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 TMEM163Q8TC26 289 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 OR51E1Q8TCB6 317 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 TRUB1Q8WWH5 349 aaKnown RBP6.37□□□□□ -1.39
CD44-211ENST00000442151 NPFFR1Q9GZQ6 430 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 PLEKHA1Q9HB21 404 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 SIRT7Q9NRC8 400 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
CD44-211ENST00000442151 PCDHGB5Q9Y5G0 923 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 ORC6Q9Y5N6 252 aa6.37□□□□□ -1.39
CD44-211ENST00000442151 METTL15A6NJ78 407 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 RFPL4AA6NLU0 287 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 RFPL4AL1F8VTS6 287 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 ANGPTL7O43827 346 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 CIB2O75838 187 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms