RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SCO1O75880 301 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 JTBO76095 146 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 COX5AP20674 150 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 AVPR2P30518 371 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 NAAAQ02083 359 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 PRICKLE4Q2TBC4 344 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 TMEM211Q6ICI0 200 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 C19orf48Q6RUI8 117 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 CLEC9AQ6UXN8 241 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 SPRED2Q7Z698 418 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 APOBEC4Q8WW27 367 aaKnown RBP9.22□□□□□ -0.93
SHPRH-206ENST00000438092 C4orf45Q96LM5 186 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 TCEAL7Q9BRU2 100 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 A0A1W2PPQ1 181 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 RFPL4AA6NLU0 287 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 RFPL4AL1F8VTS6 287 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 DNPH1O43598 174 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 GYPAP02724 150 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 THBS4P35443 961 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 SLC37A1P57057 533 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 TPPP2P59282 170 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 ETFDHQ16134 617 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 PAPPA2Q9BXP8 1791 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 IGHV3-21A0A0B4J1V1 117 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 CYC1P08574 325 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 AMTP48728 403 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 FNDC7Q5VTL7 733 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 TMEM88Q6PEY1 159 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 CCDC190Q86UF4 302 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 NKX6-2Q9C056 277 aaPredicted RBP9.22□□□□□ -0.93
SHPRH-206ENST00000438092 ZFP64Q9NPA5 681 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 OTOFQ9HC10 1997 aa9.22□□□□□ -0.93
SHPRH-206ENST00000438092 WDR38Q5JTN6 314 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 PPP1R1CQ8WVI7 109 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 LSM2Q9Y333 95 aaKnown RBP9.21□□□□□ -0.93
SHPRH-206ENST00000438092 MRPS18BQ9Y676 258 aaKnown RBP9.21□□□□□ -0.93
SHPRH-206ENST00000438092 TRBV5-4A0A0C4DH59 114 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 LPAR6P43657 344 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 FAM3AP98173 230 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 TUSC5Q8IXB3 177 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 BCL2L2Q92843 193 aaPredicted RBP9.21□□□□□ -0.93
SHPRH-206ENST00000438092 SRRQ9GZT4 340 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 PCDHGA9Q9Y5G4 932 aaKnown RBP9.21□□□□□ -0.93
SHPRH-206ENST00000438092 EML2O95834 649 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 CALCRP30988 508 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 RNFT1Q5M7Z0 435 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 ZNF425Q6IV72 752 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 OTOSQ8NHW6 89 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 ITPKCQ96DU7 683 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 GABARAPL3Q9BY60 117 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 CHODLQ9H9P2 273 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 SCPEP1Q9HB40 452 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 KPTNQ9Y664 436 aa9.21□□□□□ -0.93
SHPRH-206ENST00000438092 SPP1P10451 314 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 EIF3IQ13347 325 aaKnown RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 TRA2AQ13595 282 aaKnown RBP eCLIP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 TIPARPQ7Z3E1 657 aaKnown RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 PRR13Q9NZ81 148 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 SULT1A3P0DMM9 295 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 SULT1A4P0DMN0 295 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 FABP4P15090 132 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 PRRX1P54821 245 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 WDR89Q96FK6 387 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 CIB3Q96Q77 187 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 TCRBV5S2A0A599 114 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 K7ESF4 209 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 F2RL2O00254 374 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 GABRB1P18505 474 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 DHODHQ02127 395 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 CBLN3Q6UW01 205 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 C2orf50Q96LR7 162 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 PCGF1Q9BSM1 259 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
SHPRH-206ENST00000438092 TCFL5Q9UL49 500 aa9.21□□□□□ -0.94
SHPRH-206ENST00000438092 ZNF318Q5VUA4 2279 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 TMEM272A0A1B0GTI8 110 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 KCNAB3O43448 404 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 CISD3P0C7P0 127 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 FUT3P21217 361 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 OR3A1P47881 315 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 FOXO1Q12778 655 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 HLXQ14774 488 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-206ENST00000438092 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 ZNF416Q9BWM5 594 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 AUP1Q9Y679 476 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 EPPINO95925 133 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 SBK3P0C264 359 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 EPXP11678 715 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 NXPH1P58417 271 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 NCR3LG1Q68D85 454 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 ZNF707Q96C28 371 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-206ENST00000438092 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 TSPAN32Q96QS1 320 aa9.2□□□□□ -0.94
SHPRH-206ENST00000438092 PYCARD-AS1I3L0S3 204 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms