RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MRPL21Q7Z2W9 205 aaKnown RBP22.2■■□□□ 1.14
CPNE1-216ENST00000437340 ZADH2Q8N4Q0 377 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 C12orf45Q8N5I9 185 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-216ENST00000437340 ZSCAN4Q8NAM6 433 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-216ENST00000437340 OR56B2PQ8NGI1 322 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 PLSCR2Q9NRY7 297 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 PLEKHJ1Q9NW61 149 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 CST4P01036 141 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 AMY2BP19961 511 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 GABRR1P24046 479 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 TAS2R46P59540 309 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 FTMTQ8N4E7 242 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 TERB2Q8NHR7 220 aa22.19■■□□□ 1.14
CPNE1-216ENST00000437340 ZNF850A8MQ14 1090 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 DHODHQ02127 395 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 TGFBR3Q03167 851 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 DHRS2Q13268 280 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 GUSBP1Q15486 140 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 IGFL3Q6UXB1 125 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 TFAP2EQ6VUC0 442 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 CCDC36Q8IYA8 594 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 OR5H2Q8NGV7 314 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 STARD10Q9Y365 291 aa22.18■■□□□ 1.14
CPNE1-216ENST00000437340 IGKV1-12A0A0C4DH73 117 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 OR2AT4A6NND4 320 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 CEACAM18A8MTB9 384 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 RGS11O94810 467 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 CNOT4O95628 575 aaKnown RBP22.17■■□□□ 1.14
CPNE1-216ENST00000437340 IGKV1D-12P01611 117 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 EIF2S3P41091 472 aaKnown RBP22.17■■□□□ 1.14
CPNE1-216ENST00000437340 ID4P47928 161 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 FAM214BQ7L5A3 538 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 OSR2Q8N2R0 312 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 TRIB1Q96RU8 372 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 TMPRSS13Q9BYE2 586 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 DKK4Q9UBT3 224 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 FIGNL2A6NMB9 653 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 C6orf201Q7Z4U5 140 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 PAPOLGQ9BWT3 736 aaKnown RBP22.17■■□□□ 1.14
CPNE1-216ENST00000437340 OPN4Q9UHM6 478 aa22.17■■□□□ 1.14
CPNE1-216ENST00000437340 F5H5P2 479 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 J3QW42 95 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 GOSR2O14653 212 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 SLC22A5O76082 557 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 PLATP00750 562 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 IL2RAP01589 272 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 SNU13P55769 128 aaKnown RBP22.16■■□□□ 1.14
CPNE1-216ENST00000437340 H2BFSP57053 126 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 SIGIRRQ6IA17 410 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 ZNF767PQ75MW2 155 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 TMEM17Q86X19 198 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 UXS1Q8NBZ7 420 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 OR5L1Q8NGL2 311 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 OR51F2Q8NH61 342 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 WBP1Q96G27 269 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 ZNF75AQ96N20 296 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 ST6GALNAC5Q9BVH7 336 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 GPR160Q9UJ42 338 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 EDARQ9UNE0 448 aa22.16■■□□□ 1.14
CPNE1-216ENST00000437340 PQLC2LA1A4F0 135 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 ZBTB25P24278 435 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 UBE2MP61081 183 aaKnown RBP22.15■■□□□ 1.14
CPNE1-216ENST00000437340 PRDX4Q13162 271 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 ZNF169Q14929 603 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-216ENST00000437340 TAF9Q16594 264 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 C2orf68Q2NKX9 166 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 LGALSLQ3ZCW2 172 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-216ENST00000437340 LYG2Q86SG7 212 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 MDP1Q86V88 176 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 EMG1Q92979 244 aaKnown RBP22.15■■□□□ 1.14
CPNE1-216ENST00000437340 WNT2BQ93097 391 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 SCGB3A2Q96PL1 93 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 DMXL2Q8TDJ6 3036 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 TOXO94900 526 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 NGFP01138 241 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 HLA-AP01891 365 aaKnown RBP22.15■■□□□ 1.14
CPNE1-216ENST00000437340 TPOP07202 933 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 OR3A3P47888 321 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 TAS2R31P59538 309 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 TSPAN5P62079 268 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 NKAPLQ5M9Q1 402 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 ZDHHC23Q8IYP9 409 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 Q8NFD4 153 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 OR5AP2Q8NGF4 316 aa22.15■■□□□ 1.14
CPNE1-216ENST00000437340 CHATP28329 748 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 HLXQ14774 488 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-216ENST00000437340 CEACAM21Q3KPI0 293 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 RPUSD3Q6P087 351 aaKnown RBP22.14■■□□□ 1.13
CPNE1-216ENST00000437340 LPCAT3Q6P1A2 487 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 C11orf88Q6PI97 169 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 C17orf107Q6ZR85 190 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 SAXO1Q8IYX7 474 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 ZNF611Q8N823 705 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 SLC30A7Q8NEW0 376 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 MED12LQ86YW9 2145 aa22.14■■□□□ 1.13
CPNE1-216ENST00000437340 HOXB1P14653 301 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-216ENST00000437340 WNT5AP41221 380 aa22.13■■□□□ 1.13
CPNE1-216ENST00000437340 Q6ZT83 130 aa22.13■■□□□ 1.13
CPNE1-216ENST00000437340 LHFPL1Q86WI0 220 aa22.13■■□□□ 1.13
CPNE1-216ENST00000437340 SLC7A5P1Q8MH63 180 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms