RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 SPACA5Q96QH8 159 aa12.39□□□□□ -0.43
SKA2-202ENST00000437036 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
SKA2-202ENST00000437036 WIPI2Q9Y4P8 454 aa12.39□□□□□ -0.43
SKA2-202ENST00000437036 PPIAL4AQ9Y536 164 aa12.39□□□□□ -0.43
SKA2-202ENST00000437036 CSMD2Q7Z408 3487 aa12.39□□□□□ -0.43
SKA2-202ENST00000437036 TRAV38-1A0A0B4J264 116 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 SRRM5B3KS81 715 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 LGALS8O00214 317 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 PDCD5O14737 125 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 FSTL3O95633 263 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 LHBP01229 141 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 ACAA1P09110 424 aaPredicted RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 TMEM225BP0DP42 221 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 GADD45AP24522 165 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 MDH2P40926 338 aaKnown RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 RANBP1P43487 201 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 PSMD7P51665 324 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 PDZK1IP1Q13113 114 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 GLT8D1Q68CQ7 371 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 C22orf42Q6IC83 251 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 CALHM1Q8IU99 346 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 Q8IYB0 196 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 MUC20Q8N307 709 aaPredicted RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 JAGN1Q8N5M9 183 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 ZSCAN4Q8NAM6 433 aaPredicted RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 POC1AQ8NBT0 407 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 S100A13Q99584 98 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 CHCHD6Q9BRQ6 235 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 OR51E2Q9H255 320 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 METTL17Q9H7H0 456 aaPredicted RBP12.38□□□□□ -0.43
SKA2-202ENST00000437036 DCAF16Q9NXF7 216 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 RASL12Q9NYN1 266 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 DNAJB11Q9UBS4 358 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 DYSFO75923 2080 aa12.38□□□□□ -0.43
SKA2-202ENST00000437036 TRAV1-2A0A0B4J238 106 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 LOC100506127A0A0U1RQW1 187 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 OOEPA6NGQ2 149 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 AKR7A2O43488 359 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 SYNGR1O43759 233 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 NOS1APO75052 506 aaPredicted RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 RHBDL1O75783 438 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 TFAP2AP05549 437 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 HEXAP06865 529 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 PGA5P0DJD9 388 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 MUC1P15941 1255 aaPredicted RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 GLRA1P23415 457 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 CD80P33681 288 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 RPL5P46777 297 aaKnown RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 MICBQ29980 383 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 LRRC28Q86X40 367 aaPredicted RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 SPICQ8N5J4 248 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 OR13F1Q8NGS4 319 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 TNFAIP8L1Q8WVP5 186 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 TMIGD2Q96BF3 282 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 KCTD7Q96MP8 289 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 GAL3ST1Q99999 423 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 REG4Q9BYZ8 158 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 FAM192AQ9GZU8 254 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 ELL3Q9HB65 397 aaPredicted RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 RHOFQ9HBH0 211 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 PCDHB16Q9NRJ7 776 aa12.37□□□□□ -0.43
SKA2-202ENST00000437036 TXNL4BQ9NX01 149 aaKnown RBP12.37□□□□□ -0.43
SKA2-202ENST00000437036 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
SKA2-202ENST00000437036 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 SPRY1O43609 319 aaPredicted RBP12.36□□□□□ -0.43
SKA2-202ENST00000437036 NDUFA2O43678 99 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 AIREO43918 545 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 NXPH2O95156 264 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 ZNF205O95201 554 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 USF1P22415 310 aaPredicted RBP12.36□□□□□ -0.43
SKA2-202ENST00000437036 PTGFRP43088 359 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 ALDH3B2P48448 385 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 GMFBP60983 142 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 SMIM21Q3B7S5 101 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 TMEM155Q4W5P6 130 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 SFRP4Q6FHJ7 346 aaPredicted RBP12.36□□□□□ -0.43
SKA2-202ENST00000437036 FIP1L1Q6UN15 594 aaKnown RBP12.36□□□□□ -0.43
SKA2-202ENST00000437036 LRRTM1Q86UE6 522 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 FAM90A1Q86YD7 464 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 DEFB108BQ8NET1 73 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 PXT1Q8NFP0 134 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 SLAMF9Q96A28 289 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 NRIP2Q9BQI9 281 aa12.36□□□□□ -0.43
SKA2-202ENST00000437036 SMURF1Q9HCE7 757 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms