RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZNF774Q6NX45 483 aa14.15□□□□□ -0.14
PTPN13-204ENST00000436978 FBXO34Q9NWN3 711 aa14.15□□□□□ -0.14
PTPN13-204ENST00000436978 THYN1Q9P016 225 aa14.15□□□□□ -0.14
PTPN13-204ENST00000436978 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 A0A1B0GTL3 188 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF785A8K8V0 405 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 NGFP01138 241 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ADRB1P08588 477 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ADGRL4Q9HBW9 690 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 IL9P15248 144 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF17P17021 662 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 SRP14P37108 136 aaKnown RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 RPS27P42677 84 aaKnown RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF547Q8IVP9 402 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 GPR32P1Q8NGA4 272 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 OR10Z1Q8NGY1 313 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 LSM2Q9Y333 95 aaKnown RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 BCL2L11O43521 198 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ZIC1Q15915 447 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 TMEM65Q6PI78 240 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 ARSGQ96EG1 525 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 URGCP-MRPS24S4R325 110 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 RP1L1Q8IWN7 2480 aaPredicted RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 GP1BAP07359 652 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 WNT3P56703 355 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 NKG7Q16617 165 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 PABPC1L2AQ5JQF8 200 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 DERL3Q96Q80 235 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 TMEM147Q9BVK8 224 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 IL5P05113 134 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 H3F3AP84243 136 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 D2HGDHQ8N465 521 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 AUNIPQ9H7T9 357 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 P2RX3P56373 397 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 CXorf67Q86X51 503 aaPredicted RBP14.14□□□□□ -0.15
PTPN13-204ENST00000436978 TRAV38-1A0A0B4J264 116 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 SLC25A35Q3KQZ1 300 aa14.14□□□□□ -0.15
PTPN13-204ENST00000436978 RAB5AP20339 215 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 WDR38Q5JTN6 314 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 FAM122CQ6P4D5 195 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 RAB1CQ92928 201 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 TRMT61AQ96FX7 289 aaKnown RBP14.13□□□□□ -0.15
PTPN13-204ENST00000436978 SPP1P10451 314 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF32P17041 273 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 C20orf24Q9BUV8 137 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF385DQ9H6B1 395 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 DCTDP32321 178 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 MPC1Q9Y5U8 109 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 SEC16AO15027 2179 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 FXYD1O00168 92 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 UCNP55089 124 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 LCN15Q6UWW0 184 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 GRAMD2BQ96HH9 432 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 ZNF835Q9Y2P0 537 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 M0R1X1 148 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 RER1O15258 196 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 HNF1AP20823 631 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 PPP1R1CQ8WVI7 109 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 IGHV5-10-1A0A0J9YXX1 117 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 HIST1H1DP16402 221 aaKnown RBP14.13□□□□□ -0.15
PTPN13-204ENST00000436978 OXA1LQ15070 435 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 FAAP20Q6NZ36 180 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 PARP12Q9H0J9 701 aaKnown RBP14.13□□□□□ -0.15
PTPN13-204ENST00000436978 FZR1Q9UM11 496 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 ASPDHA6ND91 283 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 CDC14BO60729 498 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 OPRK1P41145 380 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 OR13D1Q8NGV5 346 aa14.13□□□□□ -0.15
PTPN13-204ENST00000436978 A0A1B0GTQ1 180 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 PRSS41Q7RTY9 318 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 VASH2Q86V25 355 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 GSX2Q9BZM3 304 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 WDR61Q9GZS3 305 aaKnown RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 LYZL6O75951 148 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 SIGLECL1Q8N7X8 197 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 NTNG2Q96CW9 530 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 ACY3Q96HD9 319 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 PDGFBP01127 241 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 FGF9P31371 208 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 SOX8P57073 446 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 TCTN1Q2MV58 587 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 RND1Q92730 232 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 RAB40CQ96S21 281 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 CST2P09228 141 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 DGAT2L6Q6ZPD8 337 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 SMIM7Q9BQ49 75 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 CELA2BP08218 269 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 FMODQ06828 376 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 OR2T2Q6IF00 324 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 OR8B3Q8NGG8 313 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 OR8B2Q96RD0 313 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 C20orf141Q9NUB4 165 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 PRSS44E7EML9 344 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 PDGFAP04085 211 aa14.12□□□□□ -0.15
PTPN13-204ENST00000436978 LSM6P62312 80 aaKnown RBP14.12□□□□□ -0.15
PTPN13-204ENST00000436978 TMEM123Q8N131 208 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms