RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 IL13RA1P78552 427 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 INPP5JQ15735 1006 aaPredicted RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PLEKHN1Q494U1 663 aaPredicted RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PDSS1Q5T2R2 415 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 SFRP5Q5T4F7 317 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 DCAF12Q5T6F0 453 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PRAMEF20Q5VT98 475 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 DCAF12L2Q5VW00 463 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 OTPQ5XKR4 325 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF660Q6AZW8 331 aaPredicted RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 SIGIRRQ6IA17 410 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 OR10K2Q6IF99 312 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 CRIP3Q6Q6R5 217 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ACOT7LQ6ZUV0 252 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 FAM57BQ71RH2 274 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF546Q86UE3 836 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF101Q8IZC7 436 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 CHST4Q8NCG5 386 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 OR4K15Q8NH41 348 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 STOML3Q8TAV4 291 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 CPNE4Q96A23 557 aaPredicted RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF799Q96GE5 643 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 LOXL4Q96JB6 756 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ADGRG7Q96K78 797 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 LYZL4Q96KX0 146 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 GAL3ST1Q99999 423 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 REG4Q9BYZ8 158 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 SPRY4Q9C004 299 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 STRADBQ9C0K7 418 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 FXYD6Q9H0Q3 95 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 AKIRIN1Q9H9L7 192 aaPredicted RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 RNF122Q9H9V4 155 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PCDHB16Q9NRJ7 776 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 SLC39A1Q9NY26 324 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF319Q9P2F9 582 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PADI1Q9ULC6 663 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 NOP16Q9Y3C1 178 aaKnown RBP6.49□□□□□ -1.37
COL17A1-204ENST00000433822 EML6Q6ZMW3 1958 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
COL17A1-204ENST00000433822 SPTAN1Q13813 2472 aaKnown RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 A0A0A6YYD4 124 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 MEIS3P1A6NDR6 274 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 OR6C6A6NF89 314 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 OR2AT4A6NND4 320 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 NUDT19A8MXV4 375 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 H3BS24 57 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 H3BSH0 61 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 BET1O15155 118 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SMAD9O15198 467 aaKnown RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 CYTIPO60759 359 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 FGF2P09038 288 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PET100P0DJ07 73 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 COX5BP10606 129 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 CCL4P13236 92 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 ABOP16442 354 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 GNB3P16520 340 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 OR3A4PP47883 348 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 LINC00310P59036 64 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SORDQ00796 357 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PPP1R1AQ13522 171 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 CNN3Q15417 329 aaKnown RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SGCAQ16586 387 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SRSF7Q16629 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 RSPO1Q2MKA7 263 aaPredicted RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SCGB2B2Q4G0G5 96 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 TRIM61Q5EBN2 209 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 CARD17Q5XLA6 110 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PLXDC2Q6UX71 529 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 LHFPL2Q6ZUX7 228 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PPP1R32Q7Z5V6 425 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 TMED4Q7Z7H5 227 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 GGNQ86UU5 652 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 COMMD2Q86X83 199 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PDZD9Q8IXQ8 264 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 STPG2Q8N412 459 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 Q8NFD4 153 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PXT1Q8NFP0 134 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 OR5H2Q8NGV7 314 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 COQ8AQ8NI60 647 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 NUDCD2Q8WVJ2 157 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 EMG1Q92979 244 aaKnown RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 RELTQ969Z4 430 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 SPSB4Q96A44 273 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 FAM71F1Q96KD3 344 aaPredicted RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 Q96M66 194 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF385AQ96PM9 386 aaKnown RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 TAAR9Q96RI9 348 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 VRK1Q99986 396 aaPredicted RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM38BQ9NVV0 291 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 RASL12Q9NYN1 266 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 RDH8Q9NYR8 311 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 DNAJB11Q9UBS4 358 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 PFDN2Q9UHV9 154 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 TCFL5Q9UL49 500 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 BOKQ9UMX3 212 aaPredicted RBP6.48□□□□□ -1.37
COL17A1-204ENST00000433822 WASF3Q9UPY6 502 aa6.48□□□□□ -1.37
COL17A1-204ENST00000433822 OSGIN2Q9Y236 505 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms