RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
DDX56-205ENST00000433257 HSF4Q9ULV5 492 aa12.97□□□□□ -0.33
DDX56-205ENST00000433257 V9GYS6 101 aa12.97□□□□□ -0.33
DDX56-205ENST00000433257 OTOGLQ3ZCN5 2332 aa12.97□□□□□ -0.33
DDX56-205ENST00000433257 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
DDX56-205ENST00000433257 PIGBOS1A0A0B4J2F0 54 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 ZNF726A6NNF4 738 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 ADAM10O14672 748 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 YKT6O15498 198 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 RAD51DO75771 328 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 F12P00748 615 aaPredicted RBP12.96□□□□□ -0.33
DDX56-205ENST00000433257 IL11P20809 199 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 CAMLGP49069 296 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 SLC38A9Q8NBW4 561 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 LMX1AQ8TE12 382 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 HAS2Q92819 552 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 PGAM5Q96HS1 289 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 AKR1E2Q96JD6 320 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 BANF2Q9H503 90 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 NECAP2Q9NVZ3 263 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 PADI1Q9ULC6 663 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.33
DDX56-205ENST00000433257 EP300Q09472 2414 aaPredicted RBP12.96□□□□□ -0.33
DDX56-205ENST00000433257 RIF1Q5UIP0 2472 aaKnown RBP12.96□□□□□ -0.34
DDX56-205ENST00000433257 C7orf77A4D0Y5 90 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 WRBO00258 174 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 CDX4O14627 284 aaPredicted RBP12.96□□□□□ -0.34
DDX56-205ENST00000433257 KCNAB3O43448 404 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 GDF9O60383 454 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 DHRS3O75911 302 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 HTR3BO95264 441 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 GLAP06280 429 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 RAB5AP20339 215 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 CHATP28329 748 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 PTGER4P35408 488 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 EIF1P41567 113 aaKnown RBP12.96□□□□□ -0.34
DDX56-205ENST00000433257 PPT1P50897 306 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 HNRNPKP61978 463 aaKnown RBP eCLIP12.96□□□□□ -0.34
DDX56-205ENST00000433257 FOXF1Q12946 379 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 HIST3H3Q16695 136 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 AWAT1Q58HT5 328 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 CCDC71LQ8N9Z2 235 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 STT3BQ8TCJ2 826 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 ROBO4Q8WZ75 1007 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 ABHD14BQ96IU4 210 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 FAM71F1Q96KD3 344 aaPredicted RBP12.96□□□□□ -0.34
DDX56-205ENST00000433257 CHST5Q9GZS9 411 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 SLC35B3Q9H1N7 401 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 TMPRSS5Q9H3S3 457 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 KCNJ16Q9NPI9 418 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 B3GAT1Q9P2W7 334 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 AMDHD2Q9Y303 409 aa12.96□□□□□ -0.34
DDX56-205ENST00000433257 ADAMTS9Q9P2N4 1935 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 PMS2P1A4D2B8 440 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 UMAD1C9J7I0 102 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 LMO7DNF2Z398 122 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 AP4M1O00189 453 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
DDX56-205ENST00000433257 DUX1O43812 170 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 HPNP05981 417 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 EIF2S3P41091 472 aaKnown RBP12.95□□□□□ -0.34
DDX56-205ENST00000433257 SLC35A1P78382 337 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 PLXDC2Q6UX71 529 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 GJC3Q8NFK1 279 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
DDX56-205ENST00000433257 ZNF2Q9BSG1 426 aaPredicted RBP12.95□□□□□ -0.34
DDX56-205ENST00000433257 KNG1P01042 644 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 CYC1P08574 325 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ZNF883P0CG24 379 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ZNF44P15621 663 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 PTPRZ1P23471 2315 aaPredicted RBP12.94□□□□□ -0.34
DDX56-205ENST00000433257 DUSP1P28562 367 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 UCP3P55916 312 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 MYBPHQ13203 477 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ZNF266Q14584 549 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 MIDNQ504T8 468 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 RPUSD3Q6P087 351 aaKnown RBP12.94□□□□□ -0.34
DDX56-205ENST00000433257 FAM57BQ71RH2 274 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 FAM185AQ8N0U4 392 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 LGI3Q8N145 548 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 OR1L3Q8NH93 324 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 NANPQ8TBE9 248 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.94□□□□□ -0.34
DDX56-205ENST00000433257 WNT2BQ93097 391 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 ANGPTL4Q9BY76 406 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 PNRC2Q9NPJ4 139 aaKnown RBP12.94□□□□□ -0.34
DDX56-205ENST00000433257 C19orf12Q9NSK7 152 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 PLEKHJ1Q9NW61 149 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 DHCR7Q9UBM7 475 aaKnown RBP12.94□□□□□ -0.34
DDX56-205ENST00000433257 ANXA10Q9UJ72 324 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 CACNA1EQ15878 2313 aa12.94□□□□□ -0.34
DDX56-205ENST00000433257 EXPH5Q8NEV8 1989 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms