RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF430Q9H8G1 570 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 HMG20AQ9NP66 347 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZC4H2Q9NQZ6 224 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 DYRK4Q9NR20 520 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CHRAC1Q9NRG0 131 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 TREX1Q9NSU2 369 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 MCUBQ9NWR8 336 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNRD1Q9P1U0 126 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZMAT5Q9UDW3 170 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 OPN4Q9UHM6 478 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 USP24Q9UPU5 2620 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 CEP250Q9BV73 2442 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 GCN1Q92616 2671 aaKnown RBP1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLXNB2O15031 1838 aa1.89□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLXNA3P51805 1871 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 BRWD1Q9NSI6 2320 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGLV3-16A0A075B6K0 115 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGKV1-27A0A075B6S5 117 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGHV1-69DA0A0B4J2H0 117 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 GSTTP1A0A1W2PQM5 241 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 KRBOX1C9JBD0 128 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 TAAR5O14804 337 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAD1O60671 282 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 MPDU1O75352 247 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 RDH16O75452 317 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 HSBP1O75506 76 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC25A14O95258 325 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 LCA5LO95447 670 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMIM10L2AP0DMW4 78 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMIM10L2BP0DMW5 78 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 THRAP10827 490 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 PMCHP20382 165 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 HTR1DP28221 377 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 POLR2IP36954 125 aaKnown RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 RBM34P42696 430 aaKnown RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 NDUFA8P51970 172 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 DYNLL1P63167 89 aaKnown RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLAQ13239 276 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF829Q3KNS6 432 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF691Q5VV52 312 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 MLIPQ5VWP3 458 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 FBXO36Q8NEA4 188 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR51L1Q8NGJ5 315 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR8U1Q8NH10 309 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR8D1Q8WZ84 308 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 DYNLL2Q96FJ2 89 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 PDXPQ96GD0 296 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMARCD1Q96GM5 515 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 NARS2Q96I59 477 aaKnown RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 C18orf15Q96N68 181 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 TEAD3Q99594 435 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 CHID1Q9BWS9 393 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLA2G2FQ9BZM2 168 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 KIR3DX1Q9H7L2 352 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 REEP1Q9H902 201 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 EDA2RQ9HAV5 297 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZDHHC4Q9NPG8 344 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 RRAGDQ9NQL2 400 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 RGS18Q9NS28 235 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF355PQ9NSJ1 428 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 DDX19AQ9NUU7 478 aaKnown RBP1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 CTSFQ9UBX1 484 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF222Q9UK12 451 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 KLK12Q9UKR0 248 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 PSG11Q9UQ72 335 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR51B2Q9Y5P1 312 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 FRYLO94915 3013 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPTBN2O15020 2390 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 SCN1AP35498 2009 aa1.88□□□□□ -2.11
HMGB1P27-201ENST00000431429 LOC285556D6RIA3 1793 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CNOT1A5YKK6 2376 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF236Q9UL36 1845 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGKV6D-21A0A0A0MT36 114 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGHV3-72A0A0B4J1Y9 119 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A1W2PRF3 423 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A1W2PRM7 423 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 LINC01619G3V211 115 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 H0YJW9 148 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TNFRSF11BO00300 401 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 B4GALT5O43286 388 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPOPO43791 374 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPAG7O75391 227 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF324O75467 553 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 GLSO94925 669 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CSTAP01040 98 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 IVLP07476 585 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR8U9P0C7N5 309 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 STAG3L2P0CL84 134 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 HSPD1P10809 573 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 DTYMKP23919 212 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 LOXP28300 417 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ADORA1P30542 326 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 KIR3DL2P43630 455 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 PSMD4P55036 377 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 RPL23P62829 140 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CACNG7P62955 275 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CRADDP78560 199 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 RPL18AQ02543 176 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 DOCK1Q14185 1865 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms