RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RFPL4AA6NLU0 287 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 RFPL4AL1F8VTS6 287 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 J3QT63 122 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 PSMD9O00233 223 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
MSH5-208ENST00000429846 FAM107AO95990 144 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 PGA5P0DJD9 388 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 HAAOP46952 286 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 ACTR3P61158 418 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 SNAPC1Q16533 368 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CLVS2Q5SYC1 327 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CRIP3Q6Q6R5 217 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CALHM1Q8IU99 346 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 MKXQ8IYA7 352 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 HS3ST5Q8IZT8 346 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 PPP1R35Q8TAP8 253 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 C17orf50Q8WW18 174 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CFHR4Q92496 578 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 AJUBAQ96IF1 538 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
MSH5-208ENST00000429846 MNTQ99583 582 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
MSH5-208ENST00000429846 PRKDCP78527 4128 aaKnown RBP12.1□□□□□ -0.47
MSH5-208ENST00000429846 CCDC182A6NF36 153 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 DHRS7CA6NNS2 312 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 DLGAP1O14490 977 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 TTRP02766 147 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 OPN1MWP04001 364 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 MRPL3P09001 348 aaKnown RBP12.1□□□□□ -0.47
MSH5-208ENST00000429846 OPN1MW2P0DN77 364 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 OPN1MW3P0DN78 364 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 PRKACGP22612 351 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 PRDX2P32119 198 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 HCCSP53701 268 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 LGALS4P56470 323 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 LY6EQ16553 131 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 TMEM236Q5W0B7 351 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 CD177Q8N6Q3 437 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 KLHDC1Q8N7A1 406 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 CDCA4Q9BXL8 241 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
MSH5-208ENST00000429846 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSH5-208ENST00000429846 COPS3Q9UNS2 423 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
MSH5-208ENST00000429846 VGLL3A8MV65 326 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 PRR32B1ATL7 298 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 LOC110117498-PIK3R3F6TDL0 507 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
MSH5-208ENST00000429846 NXPH2O95156 264 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 MPZP25189 248 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 CRISP1P54107 249 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 CBX1P83916 185 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 MFGE8Q08431 387 aaPredicted RBP12.09□□□□□ -0.47
MSH5-208ENST00000429846 FLOT2Q14254 428 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 TMEM200BQ69YZ2 307 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 C11orf42Q8N5U0 333 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 RORBQ92753 470 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
MSH5-208ENST00000429846 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 SYNGR1O43759 233 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 FKBP6O75344 327 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 RBP4P02753 201 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 TK1P04183 234 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 BMXP51813 675 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 CXCR4P61073 352 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 ESRRGP62508 458 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 ZNF273Q14593 569 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
MSH5-208ENST00000429846 BCL2L15Q5TBC7 163 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 ZNF322Q6U7Q0 402 aaPredicted RBP12.08□□□□□ -0.48
MSH5-208ENST00000429846 SPATA24Q86W54 205 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 ELMOD2Q8IZ81 293 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 OR2T27Q8NH04 317 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 FOXRED1Q96CU9 486 aaPredicted RBP12.08□□□□□ -0.48
MSH5-208ENST00000429846 ZNF488Q96MN9 340 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 TTTY10Q9BZA0 68 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 PKIBQ9C010 78 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 GTF2A1LQ9UNN4 478 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
MSH5-208ENST00000429846 R4GMQ9 66 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 V9GYS6 101 aa12.08□□□□□ -0.48
MSH5-208ENST00000429846 TCRBV3S1A0A5B6 114 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 FAM90A8PA6NJQ4 464 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 CHST1O43916 411 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 CCL3L1P16619 93 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 COX7A1P24310 79 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1927.2 ms