RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ADIPOR1Q96A54 375 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 LANCL2Q9NS86 450 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 RCC2Q9P258 522 aaKnown RBP12.13□□□□□ -0.47
SGMS1-203ENST00000429490 KCNS2Q9ULS6 477 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF217O75362 1048 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 DEFA6Q01524 100 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 MISPQ8IVT2 679 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 TCEAL7Q9BRU2 100 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
SGMS1-203ENST00000429490 ESRP2Q9H6T0 727 aaKnown RBP12.13□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF286AQ9HBT8 521 aa12.13□□□□□ -0.47
SGMS1-203ENST00000429490 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 IFNA5P01569 189 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 S100A8P05109 93 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 MECP2P51608 486 aaKnown RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 NHLH2Q02577 135 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 FAM209BQ5JX69 171 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 CCDC71LQ8N9Z2 235 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 NOXO1Q8NFA2 376 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 OR14L1PQ8NHC6 308 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 CDCA3Q99618 268 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 PAPOLGQ9BWT3 736 aaKnown RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 FAM117AQ9C073 453 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 SLC26A1Q9H2B4 701 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 C19orf12Q9NSK7 152 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF106Q9H2Y7 1883 aaKnown RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 E5RGE8 158 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 MSR1P21757 451 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 LGI3Q8N145 548 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 OR51H1Q8NH63 302 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 SAT2Q96F10 170 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 H2AFB1P0C5Y9 115 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 RAB11AP62491 216 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 ALKBH3Q96Q83 286 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 PECRQ9BY49 303 aa12.12□□□□□ -0.47
SGMS1-203ENST00000429490 C19orf25Q9UFG5 118 aaPredicted RBP12.12□□□□□ -0.47
SGMS1-203ENST00000429490 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 YIF1AO95070 293 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 HLA-HP01893 362 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 HPNP05981 417 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 KLK3P07288 261 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 GRB2P62993 217 aaKnown RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ROS1P08922 2347 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 HSD17B6O14756 317 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 TSPAN2O60636 221 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 EFNA3P52797 238 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 TMEM50BP56557 158 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ECH1Q13011 328 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 FAM206AQ9NX38 181 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 LIPT2A6NK58 231 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 FIGNL2A6NMB9 653 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 SERPINE2P07093 398 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 GSK3AP49840 483 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 RAB5CP51148 216 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 LBX1P52954 281 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 HMGN3Q15651 99 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF845Q96IR2 970 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-203ENST00000429490 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 GNG13Q9P2W3 67 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
SGMS1-203ENST00000429490 ZNF727A8MUV8 499 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 MSTNO14793 375 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 RAMP1O60894 148 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 SULT1A1P50225 295 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 POLR2GP62487 172 aaKnown RBP eCLIP12.1□□□□□ -0.47
SGMS1-203ENST00000429490 HIST2H3PS2Q5TEC6 136 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 TCEAL6Q6IPX3 200 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 SKA3Q8IX90 412 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 ERGIC1Q969X5 290 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
SGMS1-203ENST00000429490 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 UNKLQ9H9P5 680 aaKnown RBP12.1□□□□□ -0.47
SGMS1-203ENST00000429490 SRPK3Q9UPE1 567 aa12.1□□□□□ -0.47
SGMS1-203ENST00000429490 PTRH2Q9Y3E5 179 aaKnown RBP12.1□□□□□ -0.47
SGMS1-203ENST00000429490 LHFPL6Q9Y693 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms