RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ACP7Q6ZNF0 438 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 KRT77Q7Z794 578 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 TMEM219Q86XT9 240 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 OR5A2Q8NGI9 324 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 OR2T27Q8NH04 317 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 LRGUKQ96M69 825 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 CHID1Q9BWS9 393 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 ZNF556Q9HAH1 456 aa13.39□□□□□ -0.27
VARS-216ENST00000428445 TRBV23-1A0A0A0MS06 115 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 A6NIN4 97 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 MTRF1O75570 445 aaKnown RBP13.38□□□□□ -0.27
VARS-216ENST00000428445 MRPL3P09001 348 aaKnown RBP13.38□□□□□ -0.27
VARS-216ENST00000428445 PIPP12273 146 aaPredicted RBP13.38□□□□□ -0.27
VARS-216ENST00000428445 OSMP13725 252 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 FAHP16930 419 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 ALOX5APP20292 161 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 CALB2P22676 271 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 PRDX2P32119 198 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 GNGT1P63211 74 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 CDK5Q00535 292 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 AANATQ16613 207 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 PLCXD3Q63HM9 321 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 TRPM8Q7Z2W7 1104 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 COMMD2Q86X83 199 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 OR51E1Q8TCB6 317 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 TEAD3Q99594 435 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 CITED2Q99967 270 aaPredicted RBP13.38□□□□□ -0.27
VARS-216ENST00000428445 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 PIGLQ9Y2B2 252 aa13.38□□□□□ -0.27
VARS-216ENST00000428445 TMEM269A0A1B0GVZ9 245 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 GNGT2O14610 69 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 FBXO24O75426 580 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 ZNF254O75437 659 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 ANXA8P13928 327 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 PRKACGP22612 351 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 LGALS4P56470 323 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
VARS-216ENST00000428445 LCN1P1Q5VSP4 162 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 OR5K1Q8NHB7 308 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 SGCDQ92629 289 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 R3HDM4Q96D70 268 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 NPFFR1Q9GZQ6 430 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 RANBP3Q9H6Z4 567 aaPredicted RBP13.37□□□□□ -0.27
VARS-216ENST00000428445 HEXA-AS1Q9H8Q6 139 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
VARS-216ENST00000428445 OR14J1Q9UGF5 321 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 LAMP5Q9UJQ1 280 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 ZNF281Q9Y2X9 895 aa13.37□□□□□ -0.27
VARS-216ENST00000428445 OR5B21A6NL26 309 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 AQP12BA6NM10 295 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 MAGEB4O15481 346 aaPredicted RBP13.36□□□□□ -0.27
VARS-216ENST00000428445 E2F6O75461 281 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 SLC2A5P22732 501 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 MFGE8Q08431 387 aaPredicted RBP13.36□□□□□ -0.27
VARS-216ENST00000428445 RIPPLY1Q0D2K3 151 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 APOFQ13790 326 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 AQP12AQ8IXF9 295 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 POC1AQ8NBT0 407 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 CDCA4Q9BXL8 241 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 MROQ9BYG7 248 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 RAB18Q9NP72 206 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 GPR173Q9NS66 373 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 COPS3Q9UNS2 423 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 TMEM14AQ9Y6G1 99 aa13.36□□□□□ -0.27
VARS-216ENST00000428445 hCG_1809904A0A1W2PP81 198 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 A0A1W2PPE2 198 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 A0A1W2PR64 198 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 A0A1W2PRV1 198 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 FAM90A8PA6NJQ4 464 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 GSC2O15499 205 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 ARG1P05089 322 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 HAAOP46952 286 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 DLX6P56179 175 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 LOXL3P58215 753 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 BLCAPP62952 87 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 SSX2Q16385 188 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 ASB17Q8WXJ9 295 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 DNAJC9Q8WXX5 260 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 PHF21AQ96BD5 680 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 USE1Q9NZ43 259 aa13.35□□□□□ -0.27
VARS-216ENST00000428445 A0A1W2PRX2 142 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 A6NDX4 124 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 SLC1A7O00341 560 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 NOS1APO75052 506 aaPredicted RBP13.34□□□□□ -0.27
VARS-216ENST00000428445 INMTO95050 263 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 NRASP01111 189 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 IGLV3-1P01715 115 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 ACTR3P61158 418 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 ROM1Q03395 351 aa13.34□□□□□ -0.27
VARS-216ENST00000428445 PLEKHG7Q6ZR37 379 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms