RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 LMAN1LQ9HAT1 526 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 STARD10Q9Y365 291 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 IGHV3-20A0A0C4DH32 117 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 LINC01387J3KSC0 135 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 DUX1O43812 170 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 FAHP16930 419 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 OMGP23515 440 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF84P51523 738 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 MFAP5Q13361 173 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 TAF9Q16594 264 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 AADACL3Q5VUY0 350 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 OR14K1Q8NGZ2 314 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 EGLN1Q9GZT9 426 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF442Q9H7R0 627 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A0A6YYD4 124 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A1B0GX78 115 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 TMEM176BQ3YBM2 270 aaPredicted RBP9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 SSX9Q7RTT3 188 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF610Q8N9Z0 462 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 PLPP5Q8NEB5 264 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 NEK7Q8TDX7 302 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 NTNG2Q96CW9 530 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 VN1R1Q9GZP7 353 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 PISDQ9UG56 409 aa9.48□□□□□ -0.89
ATP2C1-204ENST00000428331 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 CLN5O75503 358 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 OR5AC1P0C628 307 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 GNRHRP30968 328 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 SUCLG1P53597 346 aaKnown RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 CLDN17P56750 224 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 CNN3Q15417 329 aaKnown RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 OXGR1Q96P68 337 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 WDR77Q9BQA1 342 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 AK3Q9UIJ7 227 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 SLC7A11Q9UPY5 501 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 C9JQL5 133 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 IFNA5P01569 189 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 C9orf152Q5JTZ5 239 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 SLC25A43Q8WUT9 341 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 NKX2-4Q9H2Z4 354 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 MMP17Q9ULZ9 603 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 LHFPL6Q9Y693 200 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 SHISA8B8ZZ34 492 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF587BE7ETH6 402 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 F10P00742 488 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 MSR1P21757 451 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 TLE4Q04727 773 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 HAGHQ16775 308 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 HIST2H3PS2Q5TEC6 136 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 DEFB119Q8N690 84 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 CCDC54Q8NEL0 328 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 AKR7LQ8NHP1 331 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 ERGIC1Q969X5 290 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 TWSG1Q9GZX9 223 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 FAM86C1Q9NVL1 165 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 TMED3Q9Y3Q3 217 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 DMRT1Q9Y5R6 373 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 CRYM-AS1A6NIL9 109 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 DHRS3O75911 302 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 C1QL1O75973 258 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 MBPP02686 304 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 PRF1P14222 555 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 PMELP40967 661 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 LYPD6Q86Y78 171 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 C7orf61Q8IZ16 206 aa9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 RCL1Q9Y2P8 373 aaKnown RBP9.47□□□□□ -0.89
ATP2C1-204ENST00000428331 TRBV11-1A0A0K0K1C0 115 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 A0A1W2PPC4 97 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 MED19A0JLT2 244 aaPredicted RBP9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 ZNF724A8MTY0 619 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 MALLQ13021 153 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 OR2B11Q5JQS5 317 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 C16orf47Q6ZP98 133 aaPredicted RBP9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 LANCL3Q6ZV70 420 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 LIN37Q96GY3 246 aaPredicted RBP9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 TUBD1Q9UJT1 453 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 CA11O75493 328 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 LIAT1Q6ZQX7 453 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 RTN4RL2Q86UN3 420 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 ZFP62Q8NB50 900 aaPredicted RBP9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 TSTD1Q8NFU3 115 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 BCO1Q9HAY6 547 aa9.46□□□□□ -0.89
ATP2C1-204ENST00000428331 IGKV3D-11A0A0A0MRZ8 115 aa9.46□□□□□ -0.9
ATP2C1-204ENST00000428331 SEC14L6B5MCN3 397 aa9.46□□□□□ -0.9
ATP2C1-204ENST00000428331 YIF1AO95070 293 aa9.46□□□□□ -0.9
ATP2C1-204ENST00000428331 FBP1P09467 338 aa9.46□□□□□ -0.9
ATP2C1-204ENST00000428331 CD38P28907 300 aa9.46□□□□□ -0.9
ATP2C1-204ENST00000428331 RPL23AP62750 156 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms